Co-expression analysis

Gene ID	1620442_at
Gene name	hypothetical protein LOC100266848
Homology with Arabidopsis	Similar to At3g02110: scpl25 (serine carboxypeptidase-like 25) (HF=1e-15)
Module size	6 genes
NF	0.59
%ile	85.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.96	1620442_at	CB971589	hypothetical protein LOC100266848	-	1e-15	At3g02110	scpl25 (serine carboxypeptidase-like 25)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.97	1620170_at	CB974375	hypothetical protein LOC100246815	-	1e-4	At4g36920	AP2 (APETALA 2)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.97	1607417_at	CF512464	hypothetical protein LOC100245522	-	1e-4	At2g21730	CAD2 (CINNAMYL ALCOHOL DEHYDROGENASE HOMOLOG 2)	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.96	1611804_at	CF513259	hypothetical protein LOC100252436	-	1e-1	At2g16890	UDP-glucoronosyl/UDP-glucosyl transferase family protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.97	1620954_at	CF513203	hypothetical protein LOC100242907	-	7e-2	At4g04900	RIC10 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 10)	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.96	1612677_at	CF512277	hypothetical protein LOC100252316	-	1e+0	At3g21730	dihydroneopterin aldolase family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.8	97.8	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.5	95.7	GSM436367	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.3	95.2	GSM436420	V. riparia (VR, PI588259) SD, 13h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM436404	V. riparia (VR, PI588259) LD, 15h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.5	91.9	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.4	91.3	GSM436413	V. riparia (VR, PI588259) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM147699	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	28
2.2	89.9	GSM147700	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 24 h post inoculation	29

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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