Co-expression analysis

Gene ID 1620424_at
Gene name hypothetical protein LOC100255217
Homology with ArabidopsisSimilar to At5g05270: chalcone-flavanone isomerase family protein (HF=2e-3)
Module size 6 genes
NF 0.50
%ile 75.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5072.70.961620424_atCB349003hypothetical protein LOC100255217-2e-3At5g05270chalcone-flavanone isomerase family proteinO.I.H.G.S.X.
0.5577.30.961611091_s_atAB073014.1MYBPA1 protein-4e-13At1g22640MYB3 (MYB DOMAIN PROTEIN 3)O.I.H.G.S.X.
0.5577.30.961616094_atCF372451MYBPA1 protein-5e-8At1g18570MYB51 (MYB DOMAIN PROTEIN 51)O.I.H.G.S.X.
0.5072.70.961615542_atCF415517hypothetical protein LOC100245973-4e+0At4g26288-O.I.H.G.S.X.
0.3345.70.961619642_atCF512453hypothetical protein LOC100241575-3e-28At3g10340PAL4 (Phenylalanine ammonia-lyase 4)O.I.H.G.S.X.
0.3345.70.971615295_atCF373832hypothetical protein LOC100259092-4e-1At4g08190Ras-related GTP-binding protein, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.697.6GSM287889Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
4.497.3GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
4.196.9GSM287891Pink soft berry B23 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
4.196.9GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
3.495.5GSM287893Pink soft berry C12 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.395.2GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
3.395.2GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
3.395.2GSM147738Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation67Link to GEO
3.094.2GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
3.094.2GSM147712Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation41Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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