Co-expression analysis

Gene ID	1620424_at
Gene name	hypothetical protein LOC100255217
Homology with Arabidopsis	Similar to At5g05270: chalcone-flavanone isomerase family protein (HF=2e-3)
Module size	6 genes
NF	0.50
%ile	75.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	72.7	0.96	1620424_at	CB349003	hypothetical protein LOC100255217	-	2e-3	At5g05270	chalcone-flavanone isomerase family protein	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.96	1611091_s_at	AB073014.1	MYBPA1 protein	-	4e-13	At1g22640	MYB3 (MYB DOMAIN PROTEIN 3)	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.96	1616094_at	CF372451	MYBPA1 protein	-	5e-8	At1g18570	MYB51 (MYB DOMAIN PROTEIN 51)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.96	1615542_at	CF415517	hypothetical protein LOC100245973	-	4e+0	At4g26288	-	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.96	1619642_at	CF512453	hypothetical protein LOC100241575	-	3e-28	At3g10340	PAL4 (Phenylalanine ammonia-lyase 4)	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.97	1615295_at	CF373832	hypothetical protein LOC100259092	-	4e-1	At4g08190	Ras-related GTP-binding protein, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.6	97.6	GSM287889	Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
4.4	97.3	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
4.1	96.9	GSM287891	Pink soft berry B23 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
4.1	96.9	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
3.4	95.5	GSM287893	Pink soft berry C12 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.3	95.2	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
3.3	95.2	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
3.3	95.2	GSM147738	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	67
3.0	94.2	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
3.0	94.2	GSM147712	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	41

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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