Co-expression analysis

Gene ID 1620423_at
Gene name hypothetical protein LOC100251169
Homology with ArabidopsisSimilar to At3g53710: AGD6 (HF=3e-1)
Module size 6 genes
NF 0.48
%ile 71.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.3446.80.981620423_atBQ794906hypothetical protein LOC100251169-3e-1At3g53710AGD6O.I.H.G.S.X.
0.6081.90.991607214_atCB347082hypothetical protein LOC100247783-2e-42At2g23930SNRNP-G (PROBABLE SMALL NUCLEAR RIBONUCLEOPROTEIN G)O.I.H.G.S.X.
0.5679.40.981616375_s_atCD798570hypothetical protein LOC100259069-5e-35At5g05610AL1 (ALFIN-LIKE 1)O.I.H.G.S.X.
0.5375.20.981616117_atCD800851hypothetical protein LOC100252991-2e-70At2g18390TTN5 (TITAN 5)O.I.H.G.S.X.
0.4057.70.991614671_atCF210781hypothetical protein LOC100241316-4e-8At3g51500unknown proteinO.I.H.G.S.X.
0.3345.70.991613068_atBQ793388hypothetical protein LOC100266457-1e+0At1g22590MADS-box family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.198.1GSM322365genotype: Chardonnay - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.697.6GSM322370genotype: Incrocio Manzoni - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.696.0GSM287887Green soft berry C23 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.696.0GSM287894Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.395.2GSM287897Red soft berry C29 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.194.6GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.793.0GSM287896Pink soft berry C27 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.692.5GSM287900Red soft berry C15 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.692.5GSM287890Pink soft berry C25 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.692.5GSM287893Pink soft berry C12 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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