Co-expression analysis

Gene ID	1620412_at
Gene name	hypothetical protein LOC100247288
Homology with Arabidopsis	Similar to At1g36160: ACC1 (ACETYL-COENZYME A CARBOXYLASE 1) (HF=6e-10)
Module size	6 genes
NF	0.25
%ile	35.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	92.3	0.95	1620412_at	CF511306	hypothetical protein LOC100247288	-	6e-10	At1g36160	ACC1 (ACETYL-COENZYME A CARBOXYLASE 1)	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.96	1614440_at	BQ796922	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase	-	2e-53	At4g39980	DHS1 (3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE 1)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.97	1615742_at	CB970670	5-enolpyruvylshikimate-3-phosphate synthase	-	8e-121	At2g45300	3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.95	1618362_s_at	CF200684.1	hypothetical protein LOC100255189	-	2e-74	At1g10670	ACLA-1	O.I.	H.G.	S.X.	Please select
0.19	20.9	0.95	1610068_at	CD711769	hypothetical protein LOC100252154	-	2e-19	At2g36670	aspartyl protease family protein	O.I.	H.G.	S.X.	Please select
0.06	6.8	0.95	1609392_s_at	CF210020	hypothetical protein LOC100242395	-	2e-47	At3g57870	SCE1 (SUMO CONJUGATION ENZYME 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.0	94.2	GSM147692	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation	21
3.0	94.2	GSM147675	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	4
2.9	93.8	GSM147699	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	28
2.8	93.4	GSM147693	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	22
2.7	93.0	GSM147687	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	16
2.4	91.3	GSM147705	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	34
2.4	91.3	GSM147686	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	15
2.3	90.7	GSM147681	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	10
2.2	89.9	GSM436382	Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM147698	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation	27

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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