Co-expression analysis

Gene ID	1620402_at
Gene name	hypothetical protein LOC100243378
Homology with Arabidopsis	Similar to At2g03350: unknown protein (HF=6e-3)
Module size	8 genes
NF	0.33
%ile	46.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.75	91.3	0.94	1620402_at	CB977030	hypothetical protein LOC100243378	-	6e-3	At2g03350	unknown protein	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.95	1622089_at	BQ800092	hypothetical protein LOC100245345	-	1e-5	At1g28140	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.95	1620549_s_at	CF206023.1	-	-	4e+0	At4g14358	-	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.96	1616181_at	CF414551	hypothetical protein LOC100244265	-	4e-3	At3g08980	signal peptidase I family protein	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.96	1615220_at	CB340728	hypothetical protein LOC100262100	-	2e-10	At1g27510	-	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.94	1611400_at	CF510785	hypothetical protein LOC100266087	-	1e+0	At5g30520	unknown protein	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.95	1610431_at	BQ796643	hypothetical protein LOC100266871	-	2e-17	At1g29120	unknown protein	O.I.	H.G.	S.X.	Please select
0.18	19.4	0.95	1621180_a_at	CB971762	hypothetical protein LOC100261175	-	7e-5	At3g28460	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.9	96.6	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.2	94.9	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.8	93.4	GSM436428	V. riparia (VR, PI588259) SD, 13h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.6	92.5	GSM436426	V. riparia (VR, PI588259) SD, 13h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436373	Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.2	89.9	GSM436390	V. riparia (VR, PI588259) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436419	V. riparia (VR, PI588259) SD, 13h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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