Co-expression analysis

Gene ID	1620387_at
Gene name	hypothetical protein LOC100260954
Homology with Arabidopsis	Similar to At5g07290: AML4 (ARABIDOPSIS MEI2-LIKE 4) (HF=2e-30)
Module size	6 genes
NF	0.34
%ile	49.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	89.5	0.97	1620387_at	CD719602	hypothetical protein LOC100260954	-	2e-30	At5g07290	AML4 (ARABIDOPSIS MEI2-LIKE 4)	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.97	1606787_at	CF373239	hypothetical protein LOC100258674	-	4e-1	At1g13620	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.98	1620282_at	CB977969	hypothetical protein LOC100243325	-	5e+0	At5g13440	ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.97	1612900_at	CD797784	hypothetical protein LOC100259949	-	5e+0	At5g44585	unknown protein	O.I.	H.G.	S.X.	Please select
0.26	32.0	0.97	1611871_at	CF415063	dehydroascorbate reductase	-	2e-9	At1g19570	DHAR1 (dehydroascorbate reductase)	O.I.	H.G.	S.X.	Please select
0.11	11.3	0.97	1619095_s_at	CB341757	hypothetical protein LOC100257742	-	8e-8	At5g63280	zinc finger (C2H2 type) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.1	94.6	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.3	90.7	GSM322364	genotype: Chardonnay - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.2	89.9	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.0	88.2	GSM436366	Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
1.9	87.2	GSM147731	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	60
1.8	86.0	GSM436391	V. riparia (VR, PI588259) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM436399	V. riparia (VR, PI588259) LD, 15h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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