Co-expression analysis

Gene ID	1620375_at
Gene name	hypothetical protein LOC100252099
Homology with Arabidopsis	Similar to At3g05840: ATSK12 (HF=3e-13)
Module size	6 genes
NF	0.23
%ile	32.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.97	1620375_at	CA814054	hypothetical protein LOC100252099	-	3e-13	At3g05840	ATSK12	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.95	1610473_at	CD008037	hypothetical protein LOC100259805	-	3e-1	At3g10980	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.96	1611650_at	CA808599	hypothetical protein LOC100244122	-	3e-26	At2g23320	WRKY15	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.95	1618465_at	CB918507	hypothetical protein LOC100252099	-	2e-39	At5g14640	SK13 (SHAGGY-LIKE KINASE 13)	O.I.	H.G.	S.X.	Please select
0.19	20.9	0.96	1609974_at	CB977877	hypothetical protein LOC100267017	-	2e-61	At4g26610	D6PKL1 (D6 PROTEIN KINASE LIKE 1)	O.I.	H.G.	S.X.	Please select
0.08	8.5	0.95	1614039_at	CF414313	hypothetical protein LOC100246618	-	8e-1	At1g19730	ATTRX4	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.9	96.6	GSM436420	V. riparia (VR, PI588259) SD, 13h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.3	95.2	GSM436396	V. riparia (VR, PI588259) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM147719	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	48
2.5	91.9	GSM436367	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436390	V. riparia (VR, PI588259) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436399	V. riparia (VR, PI588259) LD, 15h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47
2.3	90.7	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.3	90.7	GSM436419	V. riparia (VR, PI588259) SD, 13h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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