Co-expression analysis

Gene ID	1620332_at
Gene name	similar to predicted protein
Homology with Arabidopsis	Similar to At5g10390: histone H3 (HF=1e-71)
Module size	6 genes
NF	0.95
%ile	99.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.98	1620332_at	CF415733	similar to predicted protein	-	1e-71	At5g10390	histone H3	O.I.	H.G.	S.X.	Please select
0.91	98.8	0.97	1608056_at	CF511408	hypothetical protein LOC100254490	-	4e-31	At1g08880	H2AXA	O.I.	H.G.	S.X.	Please select
0.91	98.8	0.98	1622440_at	CF372331	similar to predicted protein	-	5e-43	At5g10400	histone H3	O.I.	H.G.	S.X.	Please select
0.83	94.6	0.97	1613076_at	CB970842	-	-	2e-42	At5g59690	histone H4	O.I.	H.G.	S.X.	Please select
0.83	94.6	0.98	1612573_at	CF415684	similar to predicted protein	-	4e-65	At5g10400	histone H3	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.98	1618135_at	CB973285	hypothetical protein LOC100256203	-	1e-9	At5g27670	HTA7 (HISTONE H2A 7)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.2	94.9	GSM436356	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.9	93.8	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.9	93.8	GSM436358	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM436394	V. riparia (VR, PI588259) LD, 15h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.7	93.0	GSM147685	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	14
2.5	91.9	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.4	91.3	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
2.3	90.7	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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