Co-expression analysis

Gene ID 1620256_at
Gene name sucrose transporter-like
Homology with ArabidopsisSimilar to At1g09960: SUT4 (SUCROSE TRANSPORTER 4) (HF=2e-29)
Module size 6 genes
NF 0.43
%ile 64.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5577.30.981620256_atAF021808.1sucrose transporter-like-2e-29At1g09960SUT4 (SUCROSE TRANSPORTER 4)O.I.H.G.S.X.
0.5375.20.981610477_s_atCA818657manganese superoxide dismutase-4e-39At3g10920MSD1 (MANGANESE SUPEROXIDE DISMUTASE 1)O.I.H.G.S.X.
0.5072.70.981610574_atCF510554hypothetical protein LOC100264544-4e-38At4g33090APM1 (AMINOPEPTIDASE M1)O.I.H.G.S.X.
0.4464.10.981622694_atCB979125hypothetical protein LOC100245090-2e-28At3g12760-O.I.H.G.S.X.
0.4260.10.981609387_atCB978426similar to FIP2 (FH protein interacting protein 2); voltage-gated potassium channel-4e-48At5g55000FIP2O.I.H.G.S.X.
0.2124.00.981616039_atCF215123hypothetical protein LOC100248352-1e-20At3g55440TPI (TRIOSEPHOSPHATE ISOMERASE)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.692.5GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.591.9GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM436346Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436371Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436356Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM299462D_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.088.2GSM436367Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM436369Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage