Co-expression analysis

Gene ID	1620211_at
Gene name	hypothetical protein LOC100261483
Homology with Arabidopsis	Similar to At3g07565: DNA binding (HF=1e+0)
Module size	8 genes
NF	0.53
%ile	79.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	84.3	0.97	1620211_at	CF513911	hypothetical protein LOC100261483	-	1e+0	At3g07565	DNA binding	O.I.	H.G.	S.X.	Please select
0.78	92.6	0.98	1615727_at	CF205417.1	hypothetical protein LOC100261981	-	9e-2	At4g31470	pathogenesis-related protein, putative	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1616023_at	CB979152	hypothetical protein LOC100252512	-	1e-38	At1g50140	ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding	O.I.	H.G.	S.X.	Please select
0.63	84.3	0.97	1614958_at	CB347627	hypothetical protein LOC100241674	-	2e-6	At5g13050	5-FCL (5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE)	O.I.	H.G.	S.X.	Please select
0.63	84.3	0.98	1622086_at	CF207289	hypothetical protein LOC100265288	-	1e-1	At2g20480	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.98	1608770_at	CF211789	-	-	6e-21	At3g60620	phosphatidate cytidylyltransferase family protein	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.98	1619028_at	CF205704.1	hypothetical protein LOC100248919	-	3e-26	At3g60620	phosphatidate cytidylyltransferase family protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.98	1615943_at	CB971749	hypothetical protein LOC100266273	-	5e-14	At1g51980	mitochondrial processing peptidase alpha subunit, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.4	98.9	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.5	95.7	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
3.3	95.2	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
3.2	94.9	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.7	93.0	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.5	91.9	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.5	91.9	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.4	91.3	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
2.3	90.7	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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