Co-expression analysis

Gene ID	1620158_at
Gene name
Homology with Arabidopsis	Similar to At4g04953: unknown protein (HF=1e+0)
Module size	6 genes
NF	0.02
%ile	3.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.65	1620158_at	CD006392	-	-	1e+0	At4g04953	unknown protein	O.I.	H.G.	S.X.	Please select
0.04	5.2	0.92	1619004_at	BQ795665	-	-	2e+1	At5g18040	unknown protein	O.I.	H.G.	S.X.	Please select
0.03	4.2	0.94	1620868_at	CF203725.1	-	-	1e+0	At5g56810	F-box family protein	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.90	1612969_at	CK136971.1	-	-	3e+0	At4g38100	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.92	1607026_s_at	CF517351	hypothetical protein LOC100251147	-	2e+0	At2g03160	ASK19 (ARABIDOPSIS SKP1-LIKE 19)	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.92	1622446_at	CB914323	-	-	8e-2	At4g18692	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.1	94.6	GSM436411	V. riparia (VR, PI588259) SD, 13h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM436419	V. riparia (VR, PI588259) SD, 13h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436426	V. riparia (VR, PI588259) SD, 13h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436424	V. riparia (VR, PI588259) SD, 13h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436423	V. riparia (VR, PI588259) SD, 13h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436394	V. riparia (VR, PI588259) LD, 15h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436391	V. riparia (VR, PI588259) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.4	91.3	GSM436425	V. riparia (VR, PI588259) SD, 13h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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