Co-expression analysis

Gene ID 1620137_s_at
Gene name hypothetical protein LOC100260466
Homology with ArabidopsisSimilar to At3g20510: unknown protein (HF=3e+0)
Module size 6 genes
NF 0.60
%ile 87.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.981620137_s_atCB911784hypothetical protein LOC100260466-3e+0At3g20510unknown proteinO.I.H.G.S.X.
0.7792.30.971618627_atCB978179hypothetical protein LOC100253668 /// hypothetical LOC100267244-1e+0At4g2589060S acidic ribosomal protein P3 (RPP3A)O.I.H.G.S.X.
0.7189.50.981617980_atCB346475--8e-1At5g66800unknown proteinO.I.H.G.S.X.
0.6787.90.981617848_atCB346603hypothetical protein LOC100253668 /// hypothetical LOC100267244-2e-6At2g28490cupin family proteinO.I.H.G.S.X.
0.4464.10.971613161_atBQ792976hypothetical protein LOC100257921-3e+0At4g18860unknown proteinO.I.H.G.S.X.
0.3243.10.961614697_atCB346214hypothetical protein LOC100255962-5e+0At5g07550GRP19 (GLYCINE-RICH PROTEIN 19)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.094.2GSM436363Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.993.8GSM436360Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.893.4GSM436358Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM436380Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM436364Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM436379Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM436385Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM436382Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM436359Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM436381Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage