Co-expression analysis

Gene ID	1620109_s_at
Gene name	hypothetical protein LOC100243583
Homology with Arabidopsis	Similar to At3g57930: unknown protein (HF=2e+0)
Module size	7 genes
NF	0.48
%ile	71.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	81.9	0.99	1620109_s_at	BQ796928	hypothetical protein LOC100243583	-	2e+0	At3g57930	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.99	1618792_at	CB348194	-	-	1e-37	At1g61250	SC3 (SECRETORY CARRIER 3)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1609898_at	CF404373	hypothetical protein LOC100265588	-	7e-11	At5g58575	-	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1617385_at	CF513590	hypothetical protein LOC100251722	-	2e-87	At2g27020	PAG1	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.99	1615074_at	BQ794896	hypothetical protein LOC100254966	-	3e-35	At1g51710	UBP6 (UBIQUITIN-SPECIFIC PROTEASE 6)	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.99	1619414_at	CF607341	hypothetical protein LOC100241708	-	1e-8	At4g23460	beta-adaptin, putative	O.I.	H.G.	S.X.	Please select
0.30	39.4	0.99	1611412_at	CF517248	hypothetical protein LOC100244694	-	2e+0	At5g37480	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.7	97.7	GSM147699	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	28
3.6	96.0	GSM147705	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	34
3.4	95.5	GSM147687	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	16
3.0	94.2	GSM147681	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	10
2.9	93.8	GSM299459	D_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.8	93.4	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.4	91.3	GSM147693	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	22
2.3	90.7	GSM299455	C_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.2	89.9	GSM147675	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	4
2.1	89.1	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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