Co-expression analysis

Gene ID	1620064_at
Gene name	hypothetical protein LOC100251825
Homology with Arabidopsis	Similar to At3g55260: HEXO1 (BETA-HEXOSAMINIDASE 1) (HF=3e-58)
Module size	9 genes
NF	0.42
%ile	62.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	89.5	0.98	1620064_at	CF211420	hypothetical protein LOC100251825	-	3e-58	At3g55260	HEXO1 (BETA-HEXOSAMINIDASE 1)	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.99	1610024_at	CA809549	hypothetical protein LOC100250743	-	2e-33	At5g20090	unknown protein	O.I.	H.G.	S.X.	Please select
0.57	79.8	0.98	1619344_s_at	CB968636	hypothetical protein LOC100248250	-	2e+0	At3g51730	saposin B domain-containing protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1617753_at	BQ799134	hypothetical protein LOC100249945	-	3e-1	At4g12380	unknown protein	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.99	1611030_at	BQ792570	hypothetical protein LOC100257929	-	2e-22	At5g47420	-	O.I.	H.G.	S.X.	Please select
0.37	51.7	0.99	1607294_at	CB347461	hypothetical protein LOC100246786	-	4e-112	At5g58290	RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE 3)	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.99	1618227_at	CB981519	hypothetical protein LOC100256050	-	4e-20	At1g73570	suppressor of lin-12-like protein-related / sel-1 protein-related	O.I.	H.G.	S.X.	Please select
0.26	32.0	0.98	1608934_at	CF405409	hypothetical protein LOC100265538	-	3e-24	At2g28390	SAND family protein	O.I.	H.G.	S.X.	Please select
0.24	28.7	0.99	1618690_at	CF207597	hypothetical protein LOC100259195	-	3e-16	At1g20110	zinc finger (FYVE type) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.3	95.2	GSM299451	B_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.0	94.2	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.9	93.8	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.9	93.8	GSM287904	Red soft berry C31 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.8	93.4	GSM299455	C_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.8	93.4	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.5	91.9	GSM287900	Red soft berry C15 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.3	90.7	GSM287898	Red soft berry B14 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.2	89.9	GSM287902	Red soft berry C30 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.1	89.1	GSM287903	Red soft berry A7 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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