Co-expression analysis

Gene ID 1619978_at
Gene name
Homology with ArabidopsisSimilar to At5g50801: unknown protein (HF=1e+0)
Module size 37 genes
NF 0.63
%ile 89.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9499.30.891619978_atCB977451--1e+0At5g50801unknown proteinO.I.H.G.S.X.
0.8293.90.921616104_atCB004955hypothetical protein LOC100252339-7e-3At2g16580auxin-responsive protein, putativeO.I.H.G.S.X.
0.7892.60.941616279_atBQ796307hypothetical protein LOC100260173-1e-1At1g70440SRO3 (SIMILAR TO RCD ONE 3)O.I.H.G.S.X.
0.7691.50.941608916_atCB007786hypothetical protein LOC100260173-2e-2At1g73390-O.I.H.G.S.X.
0.7591.30.941612185_atCB008768hypothetical protein LOC100245556-3e-10At5g66460(1-4)-beta-mannan endohydrolase, putativeO.I.H.G.S.X.
0.7491.00.951609496_atCB914077hypothetical protein LOC100258663-4e-4At4g30410transcription factorO.I.H.G.S.X.
0.7189.50.901621352_atBQ794457hypothetical protein LOC100250600-3e-1At1g74930ORA47O.I.H.G.S.X.
0.7189.50.941616617_atAF195654.1SCUTL2-3e-5At1g75040PR5 (PATHOGENESIS-RELATED GENE 5)O.I.H.G.S.X.
0.7189.50.931610123_atCB009127hypothetical protein LOC100268010-1e+0At4g15715-O.I.H.G.S.X.
0.7189.50.941610027_atCD798118hypothetical protein LOC100253090-5e-2At1g12550oxidoreductase family proteinO.I.H.G.S.X.
0.7189.50.951621251_s_atBQ795002hypothetical protein LOC100265471-2e+1Atmg00500-O.I.H.G.S.X.
0.6988.30.941617556_s_atBQ797260proline-rich cell wall protein-like /// hypothetical protein LOC100245999-3e-2At1g76930ATEXT4 (EXTENSIN 4)O.I.H.G.S.X.
0.6888.00.961618595_atBQ798258hypothetical protein LOC100248440-5e-1At4g10950GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.6888.00.951614182_atBQ797096hypothetical protein LOC100241862-2e-5At5g24580copper-binding family proteinO.I.H.G.S.X.
0.6888.00.941608585_x_atBQ797013proline-rich cell wall protein-like-7e-7At3g07910-O.I.H.G.S.X.
0.6585.00.951615212_atCF406027ripening-related protein-like-8e+0At5g64040PSANO.I.H.G.S.X.
0.6585.00.951618256_atBQ797767hypothetical protein LOC100249006 /// hypothetical protein LOC100246355-4e+0At5g20240PI (PISTILLATA)O.I.H.G.S.X.
0.6484.70.911612883_atCF213322hypothetical protein LOC100241955-2e-95At5g20280ATSPS1F (sucrose phosphate synthase 1F)O.I.H.G.S.X.
0.6484.70.891613461_s_atAF532966.1class IV chitinase-2e+0At2g43590chitinase, putativeO.I.H.G.S.X.
0.6283.30.951608955_atCF209812hypothetical protein LOC100254904-6e-2At4g28570alcohol oxidase-relatedO.I.H.G.S.X.
0.6183.20.951611979_atCB979128hypothetical protein LOC100251016-1e-31At4g19120ERD3 (early-responsive to dehydration 3)O.I.H.G.S.X.
0.6183.20.971622331_atCD802025hypothetical protein LOC100264985-6e-7At1g11770FAD binding / catalytic/ electron carrier/ oxidoreductaseO.I.H.G.S.X.
0.6081.90.941610418_atBQ798078hypothetical protein LOC100245385-8e-13At1g20190ATEXPA11 (ARABIDOPSIS THALIANA EXPANSIN 11)O.I.H.G.S.X.
0.6081.90.921620050_atCB009432hypothetical protein LOC100244027-1e-5At5g17500glycosyl hydrolase family 5 protein / cellulase family proteinO.I.H.G.S.X.
0.5980.60.941618471_atBQ792541hypothetical protein LOC100262881-7e-12At3g28917MIF2 (MINI ZINC FINGER 2)O.I.H.G.S.X.
0.5980.60.951619493_atCB976133hypothetical protein LOC100251016-2e-30At4g19120ERD3 (early-responsive to dehydration 3)O.I.H.G.S.X.
0.5980.60.861611710_atAF532966.1class IV chitinase /// class IV endochitinase-2e+0At2g43590chitinase, putativeO.I.H.G.S.X.
0.5679.40.941613900_atBQ792601hypothetical protein LOC100247559-9e-16At4g37990ELI3-2 (ELICITOR-ACTIVATED GENE 3-2)O.I.H.G.S.X.
0.5679.40.921615374_atCB911656hypothetical protein LOC100241955-8e-1At1g34000OHP2 (ONE-HELIX PROTEIN 2)O.I.H.G.S.X.
0.5577.30.971621698_atBQ796130similar to bHLH transcription factor Upa20-8e-2At3g20510unknown proteinO.I.H.G.S.X.
0.5475.70.941612393_s_atCF207031.1hypothetical protein LOC100253090-1e+0At5g03090unknown proteinO.I.H.G.S.X.
0.5475.70.941617611_atBQ795025--1e+0At2g43018CPuORF17 (Conserved peptide upstream open reading frame 17)O.I.H.G.S.X.
0.5475.70.901609861_atBQ792428hypothetical protein LOC100246739-6e+0At5g02640unknown proteinO.I.H.G.S.X.
0.5273.90.941619862_atCB979196hypothetical protein LOC100251016-3e-1At4g32470ubiquinol-cytochrome C reductase complex 14 kDa protein, putativeO.I.H.G.S.X.
0.4767.70.961611561_a_atCD800254hypothetical protein LOC100240998-2e-2At4g36850-O.I.H.G.S.X.
0.4361.50.951621490_atCF212781hypothetical protein LOC100256024-4e-3At5g48350nucleic acid bindingO.I.H.G.S.X.
0.2632.00.921606722_atAF440310.1actin depolymerizing factor-1e-19At2g31200ADF6 (ACTIN DEPOLYMERIZING FACTOR 6)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.088.2GSM436368Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
1.886.0GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.683.3GSM436418V. riparia (VR, PI588259) SD, 13h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.683.3GSM436357Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.683.3GSM436403V. riparia (VR, PI588259) LD, 15h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
1.581.7GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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