Co-expression analysis

Gene ID	1619973_at
Gene name
Homology with Arabidopsis	Similar to At3g21970: receptor-like protein kinase-related (HF=1e+0)
Module size	6 genes
NF	0.11
%ile	18.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.82	1619973_at	CD009629	-	-	1e+0	At3g21970	receptor-like protein kinase-related	O.I.	H.G.	S.X.	Please select
0.15	15.6	0.93	1620323_at	CF204713.1	-	-	1e+0	At2g40580	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.08	8.5	0.94	1622124_at	CF514734	-	-	2e+0	At2g22570	NIC1 (NICOTINAMIDASE 1)	O.I.	H.G.	S.X.	Please select
0.06	6.8	0.94	1620984_at	CB975678	-	-	4e+0	At1g44094	unknown protein	O.I.	H.G.	S.X.	Please select
0.06	6.8	0.95	1619332_at	CF202464.1	hypothetical protein LOC100257476	-	1e+0	Atmg00450	-	O.I.	H.G.	S.X.	Please select
0.06	6.8	0.95	1618109_at	CB971579	-	-	2e-11	At3g54170	ATFIP37 (ARABIDOPSIS THALIANA FKBP12 INTERACTING PROTEIN 37)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.1	99.1	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
5.3	98.2	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.7	97.7	GSM147685	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	14
4.6	97.6	GSM147677	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	6
4.0	96.7	GSM147683	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	12
3.4	95.5	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.1	94.6	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.0	94.2	GSM147676	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	5
2.4	91.3	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.4	91.3	GSM147673	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	2

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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