Co-expression analysis

Gene ID	1619971_at
Gene name	hypothetical protein LOC100240792
Homology with Arabidopsis	Similar to At3g16420: PBP1 (PYK10-BINDING PROTEIN 1) (HF=9e-4)
Module size	6 genes
NF	0.23
%ile	32.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.55	77.3	0.91	1619971_at	CB970981	hypothetical protein LOC100240792	-	9e-4	At3g16420	PBP1 (PYK10-BINDING PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.93	1608657_at	CA814304	hypothetical protein LOC100247150	-	1e+0	At3g11530	vacuolar protein sorting 55 family protein / VPS55 family protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.92	1608470_at	CA813376	hypothetical protein LOC100247150	-	9e-12	At5g13750	ZIFL1 (ZINC INDUCED FACILITATOR-like 1)	O.I.	H.G.	S.X.	Please select
0.18	19.4	0.93	1614985_at	CB977218	hypothetical protein LOC100268005	-	3e-71	At5g19550	ASP2 (ASPARTATE AMINOTRANSFERASE 2)	O.I.	H.G.	S.X.	Please select
0.14	14.4	0.93	1620384_s_at	CA809883	similar to Os04g0533900	-	8e-20	At5g23760	heavy-metal-associated domain-containing protein	O.I.	H.G.	S.X.	Please select
0.14	14.4	0.92	1622542_a_at	BQ796994	oxalyl-CoA decarboxylase-like	-	5e-9	At5g17380	pyruvate decarboxylase family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.2	99.9	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
4.2	97.1	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
3.6	96.0	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.9	93.8	GSM287883	Green soft berry A23 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.6	92.5	GSM287866	Green hard berry B21 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.4	91.3	GSM287867	Green hard berry C1 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.3	90.7	GSM287869	Green hard berry C3 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.3	90.7	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.2	89.9	GSM287875	Green hard berry C17 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
1.9	87.2	GSM436386	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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