Co-expression analysis

Gene ID 1619954_at
Gene name hypothetical protein LOC100257028
Homology with ArabidopsisSimilar to At5g07830: AtGUS2 (Arabidopsis thaliana glucuronidase 2) (HF=7e-16)
Module size 11 genes
NF 0.54
%ile 80.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5475.70.961619954_atCB974333hypothetical protein LOC100257028-7e-16At5g07830AtGUS2 (Arabidopsis thaliana glucuronidase 2)O.I.H.G.S.X.
0.7390.80.981609143_atCF209852hypothetical protein LOC100254311-2e+1At5g66240transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.6787.90.971616512_atCF405777hypothetical LOC100244665-2e-8At5g12350Ran GTPase binding / chromatin binding / zinc ion bindingO.I.H.G.S.X.
0.6787.90.981612852_atCB976927hypothetical protein LOC100243284-5e-76At5g62890permease, putativeO.I.H.G.S.X.
0.6484.70.981608070_atCF214791hypothetical protein LOC100245501-1e+0At4g10880unknown proteinO.I.H.G.S.X.
0.5577.30.981609772_atCF511919hypothetical protein LOC100246247-3e-1At3g56880VQ motif-containing proteinO.I.H.G.S.X.
0.4666.50.981614917_atCF372079hypothetical protein LOC100267340-4e+0At5g60660PIP2O.I.H.G.S.X.
0.4666.50.981613050_atCB971087hypothetical protein LOC100248215-5e-4At1g20470auxin-responsive family proteinO.I.H.G.S.X.
0.4361.50.981607831_atBQ799075hypothetical protein LOC100249242-8e-7At3g03950protein bindingO.I.H.G.S.X.
0.4158.70.981615115_atCD801173hypothetical protein LOC100244778-1e-38At5g05080UBC22 (ubiquitin-conjugating enzyme 22)O.I.H.G.S.X.
0.3853.60.981606978_s_atCF207835hypothetical protein LOC100242245-5e-1At1g16680DNAJ heat shock N-terminal domain-containing protein / S-locus protein, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.698.4GSM322370genotype: Incrocio Manzoni - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.294.9GSM322365genotype: Chardonnay - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.094.2GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.993.8GSM436346Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.491.3GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.390.7GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436371Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.189.1GSM436409V. riparia (VR, PI588259) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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