Co-expression analysis

Gene ID	1619947_at
Gene name	hypothetical protein LOC100266603
Homology with Arabidopsis	Similar to At3g05280: integral membrane Yip1 family protein (HF=5e-6)
Module size	6 genes
NF	0.60
%ile	86.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	81.9	0.99	1619947_at	BQ794365	hypothetical protein LOC100266603	-	5e-6	At3g05280	integral membrane Yip1 family protein	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.99	1609752_at	CF213671	hypothetical protein LOC100257494	-	2e-43	At5g13430	ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative	O.I.	H.G.	S.X.	Please select
0.63	84.3	0.98	1607687_s_at	BQ792489	hypothetical protein LOC100241478	-	3e-42	At5g26667	PYR6	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1620467_s_at	CA817782	hypothetical protein LOC100250756	-	2e-9	At1g49140	NADH-ubiquinone oxidoreductase-related	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.99	1612623_at	CA817679	hypothetical protein LOC100247134	-	1e-4	At5g47890	NADH-ubiquinone oxidoreductase B8 subunit, putative	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.99	1611461_at	BQ792825	hypothetical protein LOC100246984	-	1e-37	At4g34700	complex 1 family protein / LVR family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.4	91.3	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.2	89.9	GSM287889	Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.2	89.9	GSM287899	Red soft berry C13 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.2	89.9	GSM287903	Red soft berry A7 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.1	89.1	GSM287891	Pink soft berry B23 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.0	88.2	GSM287892	Pink soft berry C11 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.0	88.2	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
1.9	87.2	GSM287901	Red soft berry C16 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
1.9	87.2	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
1.9	87.2	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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