Co-expression analysis

Gene ID 1619937_s_at
Gene name hypothetical protein LOC100248009
Homology with ArabidopsisSimilar to At5g28610: - (HF=2e+0)
Module size 18 genes
NF 0.29
%ile 40.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8394.60.941619937_s_atCB973939hypothetical protein LOC100248009-2e+0At5g28610-O.I.H.G.S.X.
0.4464.10.951620479_atCD716240--2e-13At2g29210splicing factor PWI domain-containing proteinO.I.H.G.S.X.
0.4057.70.961613609_atCF211763--1e+0At1g11230unknown proteinO.I.H.G.S.X.
0.3446.80.961616040_atCF513277--6e+0At1g57850Toll-Interleukin-Resistance (TIR) domain-containing proteinO.I.H.G.S.X.
0.3345.70.961613142_atCD802385--1e+0At5g15930PAM1 (plant adhesion molecule 1)O.I.H.G.S.X.
0.3243.10.961617315_atCF514745hypothetical protein LOC100261900-6e-26At5g65930ZWI (ZWICHEL)O.I.H.G.S.X.
0.3141.30.961618559_atCF515423hypothetical protein LOC100243779-2e-5At1g44910protein bindingO.I.H.G.S.X.
0.3039.40.951612423_atCF214059hypothetical protein LOC100241344-1e-11At5g22770alpha-ADR (alpha-adaptin)O.I.H.G.S.X.
0.2937.70.971607337_s_atCB972941hypothetical protein LOC100259812-1e-13At1g76700DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.2937.70.961610543_atCF512081--8e+0At4g35280zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.2428.70.971608405_atCF510592hypothetical protein LOC100243295-4e+0At5g34881unknown proteinO.I.H.G.S.X.
0.2327.50.971607779_atBQ796579hypothetical protein LOC100241091-5e+0At1g65620AS2 (ASYMMETRIC LEAVES 2)O.I.H.G.S.X.
0.2022.40.961611218_atCB912267hypothetical LOC100261590-3e-1At1g66360C2 domain-containing proteinO.I.H.G.S.X.
0.1718.20.971611997_atCA812801hypothetical protein LOC100249691-4e-2At5g55660-O.I.H.G.S.X.
0.1616.70.961612751_atCB346257hypothetical protein LOC100242745-5e-5At1g67195MIR414 (MICRORNA 414)O.I.H.G.S.X.
0.1515.60.971616425_atCF208709hypothetical protein LOC100260616-5e-7At2g3273026S proteasome regulatory subunit, putativeO.I.H.G.S.X.
0.1414.40.961616367_x_atCF201916.1--4e-10At5g13030unknown proteinO.I.H.G.S.X.
0.1414.40.971617652_s_atCF517834hypothetical protein LOC100249964-3e-2At3g63310glutamate bindingO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.294.9GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.390.7GSM147687Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation16Link to GEO
2.289.9GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.088.2GSM147705Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation34Link to GEO
2.088.2GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.987.2GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM287901Red soft berry C16 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.987.2GSM287875Green hard berry C17 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.987.2GSM287904Red soft berry C31 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.886.0GSM147686Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation15Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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