Co-expression analysis

Gene ID 1619882_at
Gene name hypothetical protein LOC100265088
Homology with ArabidopsisSimilar to At5g08080: SYP132 (SYNTAXIN OF PLANTS 132) (HF=9e-17)
Module size 13 genes
NF 0.26
%ile 36.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5273.90.941619882_atCF604338hypothetical protein LOC100265088-9e-17At5g08080SYP132 (SYNTAXIN OF PLANTS 132)O.I.H.G.S.X.
0.4868.80.971619940_atCF518701hypothetical protein LOC100241361 /// hypothetical protein LOC100261422-3e-2At2g32980unknown proteinO.I.H.G.S.X.
0.4057.70.971609738_atCF518474similar to ZFWD1 (zinc finger WD40 repeat protein 1); nucleic acid binding / zinc ion binding-1e+0At4g17565F-box family proteinO.I.H.G.S.X.
0.3954.90.961611589_atCF603716hypothetical protein LOC100241492-2e-61At3g06670bindingO.I.H.G.S.X.
0.3853.60.971611434_atCF603154hypothetical protein LOC100247199-5e-16At4g24220VEP1 (VEIN PATTERNING 1)O.I.H.G.S.X.
0.3853.60.961614355_atCF604126--7e-8At1g12050fumarylacetoacetase, putativeO.I.H.G.S.X.
0.3243.10.961618104_atCA808387hypothetical protein LOC100267860-1e+0At3g43880unknown proteinO.I.H.G.S.X.
0.2837.70.951616274_atCB971992hypothetical protein LOC100258912-7e-46At2g47070SPL1 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 1)O.I.H.G.S.X.
0.2734.00.961608757_atCB349275hypothetical protein LOC100266172-3e-17At5g14250COP13 (CONSTITUTIVE PHOTOMORPHOGENIC 13)O.I.H.G.S.X.
0.2022.40.961615848_atCF214849hypothetical protein LOC100250419-2e-3At2g21500protein binding / zinc ion bindingO.I.H.G.S.X.
0.2022.40.961620731_atCB340492hypothetical protein LOC100255501-1e+0At1g49840unknown proteinO.I.H.G.S.X.
0.1920.90.961612774_atCF210198hypothetical protein LOC100261536-2e+0At5g40900unknown proteinO.I.H.G.S.X.
0.1010.30.961609098_atCF603626hypothetical protein LOC100265545-2e-17At3g11400eukaryotic translation initiation factor 3G / eIF3gO.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.692.5GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM436350Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
1.886.0GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
1.784.7GSM436369Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM436363Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
1.784.7GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
1.784.7GSM147729Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation58Link to GEO
1.683.3GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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