Co-expression analysis

Gene ID	1619882_at
Gene name	hypothetical protein LOC100265088
Homology with Arabidopsis	Similar to At5g08080: SYP132 (SYNTAXIN OF PLANTS 132) (HF=9e-17)
Module size	13 genes
NF	0.26
%ile	36.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.52	73.9	0.94	1619882_at	CF604338	hypothetical protein LOC100265088	-	9e-17	At5g08080	SYP132 (SYNTAXIN OF PLANTS 132)	O.I.	H.G.	S.X.	Please select
0.48	68.8	0.97	1619940_at	CF518701	hypothetical protein LOC100241361 /// hypothetical protein LOC100261422	-	3e-2	At2g32980	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.97	1609738_at	CF518474	similar to ZFWD1 (zinc finger WD40 repeat protein 1); nucleic acid binding / zinc ion binding	-	1e+0	At4g17565	F-box family protein	O.I.	H.G.	S.X.	Please select
0.39	54.9	0.96	1611589_at	CF603716	hypothetical protein LOC100241492	-	2e-61	At3g06670	binding	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.97	1611434_at	CF603154	hypothetical protein LOC100247199	-	5e-16	At4g24220	VEP1 (VEIN PATTERNING 1)	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.96	1614355_at	CF604126	-	-	7e-8	At1g12050	fumarylacetoacetase, putative	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.96	1618104_at	CA808387	hypothetical protein LOC100267860	-	1e+0	At3g43880	unknown protein	O.I.	H.G.	S.X.	Please select
0.28	37.7	0.95	1616274_at	CB971992	hypothetical protein LOC100258912	-	7e-46	At2g47070	SPL1 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 1)	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.96	1608757_at	CB349275	hypothetical protein LOC100266172	-	3e-17	At5g14250	COP13 (CONSTITUTIVE PHOTOMORPHOGENIC 13)	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.96	1615848_at	CF214849	hypothetical protein LOC100250419	-	2e-3	At2g21500	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.96	1620731_at	CB340492	hypothetical protein LOC100255501	-	1e+0	At1g49840	unknown protein	O.I.	H.G.	S.X.	Please select
0.19	20.9	0.96	1612774_at	CF210198	hypothetical protein LOC100261536	-	2e+0	At5g40900	unknown protein	O.I.	H.G.	S.X.	Please select
0.10	10.3	0.96	1609098_at	CF603626	hypothetical protein LOC100265545	-	2e-17	At3g11400	eukaryotic translation initiation factor 3G / eIF3g	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.6	92.5	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436350	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
1.8	86.0	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
1.7	84.7	GSM436369	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM436363	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
1.7	84.7	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
1.7	84.7	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
1.6	83.3	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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