Co-expression analysis

Gene ID	1619881_at
Gene name
Homology with Arabidopsis	Similar to At5g48860: unknown protein (HF=5e+0)
Module size	13 genes
NF	0.36
%ile	53.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.51	73.2	0.89	1619881_at	CF201667.1	-	-	5e+0	At5g48860	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.93	1617531_at	CF415686	-	-	1e+0	At5g48200	unknown protein	O.I.	H.G.	S.X.	Please select
0.57	79.8	0.95	1621138_at	CB974319	-	-	2e+1	At5g29000	myb family transcription factor	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.94	1618654_at	CF513468	hypothetical protein LOC100259649	-	9e-1	At4g04614	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.95	1622561_at	CF513450	hypothetical protein LOC100264847	-	6e+0	Atmg00620	-	O.I.	H.G.	S.X.	Please select
0.48	68.8	0.96	1607019_at	CB922746	hypothetical protein LOC100251940	-	3e+0	At2g41420	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.96	1621815_at	CF213959	hypothetical protein LOC100261110	-	1e+0	At1g12630	DNA binding / transcription activator/ transcription factor	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.95	1607792_at	CF214419	hypothetical protein LOC100250805	-	1e+0	At1g10717	-	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.95	1615796_at	CF209620	-	-	2e+0	At5g42785	unknown protein	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.94	1622540_at	CF207161	hypothetical protein LOC100262384	-	4e-1	At1g61580	RPL3B (R-PROTEIN L3 B)	O.I.	H.G.	S.X.	Please select
0.28	37.7	0.94	1614831_at	CF209966	hypothetical protein LOC100243109	-	7e-8	At5g48600	ATSMC3 (ARABIDOPSIS THALIANA STRUCTURAL MAINTENANCE OF CHROMOSOME 3)	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.95	1621574_at	CF511059	hypothetical protein LOC100241803	-	3e-2	At5g28290	ATNEK3 (NIMA-RELATED KINASE3)	O.I.	H.G.	S.X.	Please select
0.15	15.6	0.93	1612383_at	CF608082	hypothetical protein LOC100253994	-	2e-5	At4g12460	ORP2B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2B)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.4	91.3	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.1	89.1	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.1	89.1	GSM322365	genotype: Chardonnay - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.9	87.2	GSM147725	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	54
1.8	86.0	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
1.8	86.0	GSM436363	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
1.8	86.0	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.7	84.7	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.7	84.7	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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