Co-expression analysis

Gene ID	1619845_at
Gene name	hypothetical protein LOC100252548
Homology with Arabidopsis	Similar to At4g33530: KUP5 (HF=4e-19)
Module size	6 genes
NF	0.58
%ile	85.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	75.2	0.98	1619845_at	CB918038	hypothetical protein LOC100252548	-	4e-19	At4g33530	KUP5	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1618226_at	CF210927	hypothetical protein LOC100259643	-	7e-77	At3g11540	SPY (SPINDLY)	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.98	1610573_at	CF210407	hypothetical protein LOC100247694	-	1e-124	At5g18580	FASS (FASS 1)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1607280_at	CF513816	hypothetical protein LOC100259978	-	8e-57	At3g13772	endomembrane protein 70, putative	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.99	1608903_at	CF516993	hypothetical protein LOC100245579	-	9e-10	At3g14100	oligouridylate-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.99	1615460_at	CF405945	hypothetical protein LOC100249750	-	2e-91	At1g06700	serine/threonine protein kinase, putative	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.2	94.9	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
3.1	94.6	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.6	92.5	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
2.4	91.3	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.3	90.7	GSM147699	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	28
2.0	88.2	GSM147714	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	43
1.9	87.2	GSM147681	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	10
1.8	86.0	GSM147687	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	16
1.7	84.7	GSM436362	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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