Co-expression analysis

Gene ID 1619823_at
Gene name hypothetical protein LOC100261518
Homology with ArabidopsisSimilar to At3g43720: protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (HF=1e-4)
Module size 9 genes
NF 0.16
%ile 24.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7591.30.941619823_atCB969271hypothetical protein LOC100261518-1e-4At3g43720protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.2734.00.951611400_atCF510785hypothetical protein LOC100266087-1e+0At5g30520unknown proteinO.I.H.G.S.X.
0.2428.70.951613578_s_atBM437454hypothetical protein LOC100258843-4e-29At2g47490mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.2124.00.951607564_atCB350061UPF0497 membrane protein 4-1e+1At5g41530-O.I.H.G.S.X.
0.1819.40.951621666_atCF404585hypothetical protein LOC100246509-2e+1At5g39950ATTRX2 (THIOREDOXIN 2)O.I.H.G.S.X.
0.1313.30.951613165_s_atCB972844L-idonate dehydrogenase-8e-21At5g51970sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putativeO.I.H.G.S.X.
0.1212.10.951621568_atCF415414hypothetical protein LOC100252433-1e+0At2g07721unknown proteinO.I.H.G.S.X.
0.1212.10.951616181_atCF414551hypothetical protein LOC100244265-4e-3At3g08980signal peptidase I family proteinO.I.H.G.S.X.
0.077.80.941614926_atCF369045--7e-8At2g45630oxidoreductase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.993.8GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.591.9GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.591.9GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.491.3GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
2.491.3GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.289.9GSM147713Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation42Link to GEO
2.289.9GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM147732Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation61Link to GEO
2.189.1GSM147712Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation41Link to GEO
2.189.1GSM147725Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation54Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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