Co-expression analysis

Gene ID	1619823_at
Gene name	hypothetical protein LOC100261518
Homology with Arabidopsis	Similar to At3g43720: protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (HF=1e-4)
Module size	9 genes
NF	0.16
%ile	24.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.75	91.3	0.94	1619823_at	CB969271	hypothetical protein LOC100261518	-	1e-4	At3g43720	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.95	1611400_at	CF510785	hypothetical protein LOC100266087	-	1e+0	At5g30520	unknown protein	O.I.	H.G.	S.X.	Please select
0.24	28.7	0.95	1613578_s_at	BM437454	hypothetical protein LOC100258843	-	4e-29	At2g47490	mitochondrial substrate carrier family protein	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.95	1607564_at	CB350061	UPF0497 membrane protein 4	-	1e+1	At5g41530	-	O.I.	H.G.	S.X.	Please select
0.18	19.4	0.95	1621666_at	CF404585	hypothetical protein LOC100246509	-	2e+1	At5g39950	ATTRX2 (THIOREDOXIN 2)	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.95	1613165_s_at	CB972844	L-idonate dehydrogenase	-	8e-21	At5g51970	sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.95	1621568_at	CF415414	hypothetical protein LOC100252433	-	1e+0	At2g07721	unknown protein	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.95	1616181_at	CF414551	hypothetical protein LOC100244265	-	4e-3	At3g08980	signal peptidase I family protein	O.I.	H.G.	S.X.	Please select
0.07	7.8	0.94	1614926_at	CF369045	-	-	7e-8	At2g45630	oxidoreductase family protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.9	93.8	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.5	91.9	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.5	91.9	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.4	91.3	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.4	91.3	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.2	89.9	GSM147713	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	42
2.2	89.9	GSM436349	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM147732	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	61
2.1	89.1	GSM147712	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	41
2.1	89.1	GSM147725	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	54

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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