Co-expression analysis

Gene ID	1619744_at
Gene name	hypothetical protein LOC100249117
Homology with Arabidopsis	Similar to At1g18070: EF-1-alpha-related GTP-binding protein, putative (HF=2e-94)
Module size	11 genes
NF	0.58
%ile	85.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.98	1619744_at	CF208885	hypothetical protein LOC100249117	-	2e-94	At1g18070	EF-1-alpha-related GTP-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.70	88.6	0.99	1613829_at	CF213502	hypothetical protein LOC100256716	-	6e-18	At1g57620	emp24/gp25L/p24 family protein	O.I.	H.G.	S.X.	Please select
0.64	84.7	0.99	1609821_at	CF212296	-	-	5e-6	At3g60250	CKB3	O.I.	H.G.	S.X.	Please select
0.59	80.6	0.99	1606962_at	CF405430	hypothetical protein LOC100244131	-	4e-13	At5g14240	-	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.99	1618974_at	CF518903	hypothetical protein LOC100264692	-	9e-40	At5g11900	eukaryotic translation initiation factor SUI1 family protein	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.99	1614380_at	CD797929	hypothetical protein LOC100267715	-	2e-1	At2g17770	ATBZIP27	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1611670_at	BQ797758	hypothetical protein LOC100241885	-	9e-70	At5g54750	transport protein particle (TRAPP) component Bet3, putative	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1612909_at	CF404929	hypothetical protein LOC100264659	-	3e-8	At3g28970	AAR3 (antiauxin-resistant 3)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1622560_at	CF211302	hypothetical protein LOC100265315	-	3e-27	At3g52850	VSR1 (VACUOLAR SORTING RECEPTOR HOMOLOG 1)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1607141_at	CD712648	hypothetical protein LOC100254376	-	1e-77	At5g19990	RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)	O.I.	H.G.	S.X.	Please select
0.41	58.7	0.99	1615712_s_at	CB911214	similar to nascent polypeptide associated complex alpha	-	2e-43	At5g13850	NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.1	96.9	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
4.1	96.9	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
3.3	95.2	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
3.2	94.9	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
3.0	94.2	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
3.0	94.2	GSM147684	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	13
2.9	93.8	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.9	93.8	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.8	93.4	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.7	93.0	GSM436351	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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