Co-expression analysis

Gene ID 1619724_at
Gene name
Homology with ArabidopsisSimilar to At5g27640: TIF3B1 (TRANSLATION INITIATION FACTOR 3B1) (HF=1e-23)
Module size 6 genes
NF 0.41
%ile 60.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4666.50.951619724_atCA818237--1e-23At5g27640TIF3B1 (TRANSLATION INITIATION FACTOR 3B1)O.I.H.G.S.X.
0.5072.70.951612675_atCK136926.1--2e-82At3g08580AAC1 (ADP/ATP CARRIER 1)O.I.H.G.S.X.
0.4464.10.961614064_atBM436771--7e-5At1g02680TAF13 (TBP-ASSOCIATED FACTOR 13)O.I.H.G.S.X.
0.4464.10.961611655_atCB913871--3e-32At2g16860GCIP-interacting family proteinO.I.H.G.S.X.
0.3345.70.961617112_atCF568911--7e-14At5g14250COP13 (CONSTITUTIVE PHOTOMORPHOGENIC 13)O.I.H.G.S.X.
0.2428.70.951613291_atCF972323.1--4e-4At3g13410unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.298.2GSM147709Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation38Link to GEO
4.096.7GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
3.294.9GSM436369Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.294.9GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
3.294.9GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
3.194.6GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.993.8GSM436391V. riparia (VR, PI588259) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.692.5GSM147738Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation67Link to GEO
2.591.9GSM436423V. riparia (VR, PI588259) SD, 13h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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