Co-expression analysis

Gene ID	1619715_at
Gene name	hypothetical protein LOC100243011
Homology with Arabidopsis	Similar to At1g30470: SIT4 phosphatase-associated family protein (HF=5e-39)
Module size	8 genes
NF	0.55
%ile	81.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.99	1619715_at	CF207152	hypothetical protein LOC100243011	-	5e-39	At1g30470	SIT4 phosphatase-associated family protein	O.I.	H.G.	S.X.	Please select
0.63	84.3	0.98	1622731_at	CF403287	hypothetical protein LOC100257054	-	8e-12	At3g55070	-	O.I.	H.G.	S.X.	Please select
0.63	84.3	0.99	1615804_at	CF403733	-	-	4e-2	At5g65910	BSD domain-containing protein	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.99	1606735_at	CB970224	hypothetical protein LOC100249353	-	4e+0	At3g15420	unknown protein	O.I.	H.G.	S.X.	Please select
0.52	73.9	0.99	1613731_at	CF513972	hypothetical protein LOC100248748	-	2e-5	At5g63840	RSW3 (RADIAL SWELLING 3)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.99	1611870_at	CF414975	hypothetical protein LOC100247177	-	8e-152	At5g09740	HAM2 (histone acetyltransferase of the MYST family 2)	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.99	1613905_at	CF210463	hypothetical protein LOC100254141	-	3e-13	At5g08160	ATPK3	O.I.	H.G.	S.X.	Please select
0.37	51.7	0.99	1613769_at	CB970019	hypothetical protein LOC100265267	-	4e-48	At1g51690	ATB ALPHA	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.7	97.7	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
4.2	97.1	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
4.1	96.9	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
3.9	96.6	GSM147714	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	43
3.8	96.4	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
3.7	96.2	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
3.5	95.7	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
3.2	94.9	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
3.0	94.2	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
3.0	94.2	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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