Co-expression analysis

Gene ID	1619683_at
Gene name	hypothetical protein LOC100263488
Homology with Arabidopsis	Similar to At5g44894: unknown protein (HF=6e-2)
Module size	6 genes
NF	0.46
%ile	68.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	93.6	0.94	1619683_at	CF373178	hypothetical protein LOC100263488	-	6e-2	At5g44894	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.94	1613690_at	CF514742	-	-	3e-1	At1g72645	unknown protein	O.I.	H.G.	S.X.	Please select
0.48	68.8	0.93	1613312_at	CB972584	hypothetical protein LOC100267290	-	7e-2	At2g32905	unknown protein	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.93	1616305_at	BQ798055	hypothetical protein LOC100265575	-	7e-2	At2g03040	transmembrane protein-related	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.95	1618508_at	CF208698	hypothetical protein LOC100254705 /// hypothetical protein LOC100260176 /// hypothetical protein LOC100263586 /// hypothetical protein LOC100266529	-	4e+0	At2g18876	unknown protein	O.I.	H.G.	S.X.	Please select
0.26	32.0	0.94	1609005_at	BQ800587	hypothetical LOC100246376	-	3e-1	At3g13782	NAP1	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.3	90.7	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.2	89.9	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.1	89.1	GSM147724	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	53
2.0	88.2	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.0	88.2	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
1.9	87.2	GSM147712	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	41
1.9	87.2	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
1.9	87.2	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
1.8	86.0	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47
1.8	86.0	GSM147719	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	48

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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