Co-expression analysis

Gene ID	1619670_at
Gene name
Homology with Arabidopsis	Similar to At1g12410: CLP2 (CLP PROTEASE PROTEOLYTIC SUBUNIT 2) (HF=3e-19)
Module size	12 genes
NF	0.23
%ile	32.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.48	68.8	0.91	1619670_at	CF568831	-	-	3e-19	At1g12410	CLP2 (CLP PROTEASE PROTEOLYTIC SUBUNIT 2)	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.94	1608135_at	CF206119.1	-	-	1e+0	At2g47650	UXS4 (UDP-XYLOSE SYNTHASE 4)	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.93	1622555_at	CD010705	-	-	3e-11	At3g17970	atToc64-III (Arabidopsis thaliana translocon at the outer membrane of chloroplasts 64-III)	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.94	1615204_at	CF371804	-	-	1e+0	At3g21580	cobalt ion transmembrane transporter	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.93	1618733_at	CB004465	-	-	7e-6	At1g66970	SVL2 (SHV3-LIKE 2)	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.93	1607040_at	CF568797	-	-	5e-24	At1g54610	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.94	1614261_at	CD717598	-	-	1e+0	At4g23885	unknown protein	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.94	1618712_at	CB003306	-	-	3e-1	At4g21330	DYT1 (DYSFUNCTIONAL TAPETUM 1)	O.I.	H.G.	S.X.	Please select
0.19	20.9	0.94	1615924_at	CD715417	-	-	2e-8	At3g09970	calcineurin-like phosphoesterase family protein	O.I.	H.G.	S.X.	Please select
0.15	15.6	0.93	1620333_at	CF608264	-	-	1e-10	At3g08020	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.14	14.4	0.93	1619050_at	CB977861	hypothetical protein LOC100249358	-	2e+0	At5g53280	PDV1 (PLASTID DIVISION1)	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.94	1607773_at	CD719602	-	-	2e-30	At5g07290	AML4 (ARABIDOPSIS MEI2-LIKE 4)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.8	96.4	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.7	93.0	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
2.7	93.0	GSM436394	V. riparia (VR, PI588259) LD, 15h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.6	92.5	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM147715	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	44
2.1	89.1	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.0	88.2	GSM436376	Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM436390	V. riparia (VR, PI588259) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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