Co-expression analysis

Gene ID 1619667_at
Gene name similar to DRT100
Homology with ArabidopsisSimilar to At5g06860: PGIP1 (POLYGALACTURONASE INHIBITING PROTEIN 1) (HF=8e-1)
Module size 6 genes
NF 0.71
%ile 94.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8394.60.951619667_atBQ797924similar to DRT100-8e-1At5g06860PGIP1 (POLYGALACTURONASE INHIBITING PROTEIN 1)O.I.H.G.S.X.
0.8394.60.941615257_atCB972713hexose transporter-like-6e-12At4g35300TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2)O.I.H.G.S.X.
0.6787.90.971614297_atBQ796093hypothetical protein LOC100264651-2e-6At4g32000protein kinase family proteinO.I.H.G.S.X.
0.6787.90.971610428_atCD012983hypothetical protein LOC100263040-2e-4At1g32090early-responsive to dehydration protein-related / ERD protein-relatedO.I.H.G.S.X.
0.5577.30.961607967_atCB009400hypothetical protein LOC100261140-4e-1At3g24860hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.4868.80.951607883_atCB969241hypothetical protein LOC100255480-5e+0At5g49215glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.299.4GSM436427V. riparia (VR, PI588259) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
7.199.1GSM436429V. riparia (VR, PI588259) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
6.698.9GSM436428V. riparia (VR, PI588259) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.194.6GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.094.2GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.893.4GSM436406V. riparia (VR, PI588259) LD, 15h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.591.9GSM436356Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.491.3GSM436408V. riparia (VR, PI588259) LD, 15h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage