Co-expression analysis

Gene ID	1619658_at
Gene name
Homology with Arabidopsis	Similar to At2g14960: GH3.1 (HF=4e-15)
Module size	7 genes
NF	0.10
%ile	18.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.55	77.3	0.91	1619658_at	CF371851	-	-	4e-15	At2g14960	GH3.1	O.I.	H.G.	S.X.	Please select
0.47	67.7	0.91	1619484_at	CA814697	hypothetical protein LOC100245801	-	3e-4	At5g21482	CKX7 (CYTOKININ OXIDASE 7)	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.91	1614504_s_at	CF372317	hypothetical protein LOC100246222	-	7e+0	At5g39860	PRE1 (PACLOBUTRAZOL RESISTANCE1)	O.I.	H.G.	S.X.	Please select
0.08	8.5	0.92	1611466_at	CF372402	hypothetical protein LOC100253536	-	7e-26	At4g19100	unknown protein	O.I.	H.G.	S.X.	Please select
0.07	7.8	0.91	1617563_s_at	CF415066	-	-	2e-1	At5g27495	ion channel inhibitor	O.I.	H.G.	S.X.	Please select
0.06	6.8	0.92	1607707_at	CB341307	hypothetical protein LOC100260840	-	4e+0	At5g05380	PRA1.B3 (PRENYLATED RAB ACCEPTOR 1.B3)	O.I.	H.G.	S.X.	Please select
0.05	6.0	0.91	1612095_at	CB978502	hypothetical protein LOC100264474	-	2e-10	At1g25440	zinc finger (B-box type) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.3	97.2	GSM436429	V. riparia (VR, PI588259) SD, 13h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.2	94.9	GSM147675	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	4
3.1	94.6	GSM287866	Green hard berry B21 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.1	94.6	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.8	93.4	GSM436428	V. riparia (VR, PI588259) SD, 13h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM147732	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	61
2.5	91.9	GSM287875	Green hard berry C17 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.3	90.7	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.1	89.1	GSM436423	V. riparia (VR, PI588259) SD, 13h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436427	V. riparia (VR, PI588259) SD, 13h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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