Co-expression analysis

Gene ID	1619614_at
Gene name	hypothetical protein LOC100249831
Homology with Arabidopsis	Similar to At3g14350: SRF7 (STRUBBELIG-RECEPTOR FAMILY 7) (HF=2e-36)
Module size	11 genes
NF	0.47
%ile	70.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.74	91.0	0.96	1619614_at	CF372273	hypothetical protein LOC100249831	-	2e-36	At3g14350	SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)	O.I.	H.G.	S.X.	Please select
0.72	89.7	0.97	1613022_s_at	CF569215.1	hypothetical protein LOC100261985	-	3e+0	At5g28310	oxidoreductase-related	O.I.	H.G.	S.X.	Please select
0.63	84.3	0.98	1606646_at	CA812296	hypothetical protein LOC100264115	-	2e-23	At5g09870	CESA5 (CELLULOSE SYNTHASE 5)	O.I.	H.G.	S.X.	Please select
0.56	79.4	0.98	1622512_at	CF208965	hypothetical protein LOC100260682	-	4e-27	At4g38430	ROPGEF1	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.97	1614933_at	CB003963	hypothetical protein LOC100252359	-	1e+0	At2g32450	calcium-binding EF hand family protein	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.97	1615577_at	CB340193	hypothetical protein LOC100256811	-	4e-92	At5g05170	CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1)	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.98	1620765_at	CF215290	hypothetical protein LOC100266143	-	2e-124	At1g20090	ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2)	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.98	1619440_at	CB971034	hypothetical protein LOC100266222	-	3e-27	At1g68060	ATMAP70-1 (microtubule-associated proteins 70-1)	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.97	1606777_s_at	AF378125.1	GAI1	-	8e-11	At2g01570	RGA1 (REPRESSOR OF GA1-3 1)	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.98	1612522_at	CF403281	hypothetical protein LOC100259324	-	7e-74	At5g10840	endomembrane protein 70, putative	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.97	1620677_at	BQ797428	hypothetical protein LOC100257709	-	1e+0	At4g20440	smB (small nuclear ribonucleoprotein associated protein B)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.0	94.2	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
2.7	93.0	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.5	91.9	GSM436394	V. riparia (VR, PI588259) LD, 15h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436399	V. riparia (VR, PI588259) LD, 15h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
2.2	89.9	GSM436366	Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
2.0	88.2	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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