Co-expression analysis

Gene ID 1619614_at
Gene name hypothetical protein LOC100249831
Homology with ArabidopsisSimilar to At3g14350: SRF7 (STRUBBELIG-RECEPTOR FAMILY 7) (HF=2e-36)
Module size 11 genes
NF 0.47
%ile 70.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7491.00.961619614_atCF372273hypothetical protein LOC100249831-2e-36At3g14350SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)O.I.H.G.S.X.
0.7289.70.971613022_s_atCF569215.1hypothetical protein LOC100261985-3e+0At5g28310oxidoreductase-relatedO.I.H.G.S.X.
0.6384.30.981606646_atCA812296hypothetical protein LOC100264115-2e-23At5g09870CESA5 (CELLULOSE SYNTHASE 5)O.I.H.G.S.X.
0.5679.40.981622512_atCF208965hypothetical protein LOC100260682-4e-27At4g38430ROPGEF1O.I.H.G.S.X.
0.4666.50.971614933_atCB003963hypothetical protein LOC100252359-1e+0At2g32450calcium-binding EF hand family proteinO.I.H.G.S.X.
0.4666.50.971615577_atCB340193hypothetical protein LOC100256811-4e-92At5g05170CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1)O.I.H.G.S.X.
0.4057.70.981620765_atCF215290hypothetical protein LOC100266143-2e-124At1g20090ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2)O.I.H.G.S.X.
0.4057.70.981619440_atCB971034hypothetical protein LOC100266222-3e-27At1g68060ATMAP70-1 (microtubule-associated proteins 70-1)O.I.H.G.S.X.
0.3548.50.971606777_s_atAF378125.1GAI1-8e-11At2g01570RGA1 (REPRESSOR OF GA1-3 1)O.I.H.G.S.X.
0.3345.70.981612522_atCF403281hypothetical protein LOC100259324-7e-74At5g10840endomembrane protein 70, putativeO.I.H.G.S.X.
0.2022.40.971620677_atBQ797428hypothetical protein LOC100257709-1e+0At4g20440smB (small nuclear ribonucleoprotein associated protein B)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.094.2GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
2.793.0GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.591.9GSM436394V. riparia (VR, PI588259) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436399V. riparia (VR, PI588259) LD, 15h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436371Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
2.289.9GSM436366Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
2.088.2GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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