Co-expression analysis

Gene ID 1619610_at
Gene name hypothetical protein LOC100262106
Homology with ArabidopsisSimilar to At5g56660: ILL2 (HF=4e-20)
Module size 6 genes
NF 0.11
%ile 18.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5072.70.911619610_atCB008850hypothetical protein LOC100262106-4e-20At5g56660ILL2O.I.H.G.S.X.
0.3141.30.921610125_atCF209614--1e-3At2g41540GPDHC1O.I.H.G.S.X.
0.2937.70.921611872_atCF404465hypothetical protein LOC100266256-8e-50At2g26640KCS11 (3-KETOACYL-COA SYNTHASE 11)O.I.H.G.S.X.
0.2530.50.901617959_s_atCA809016hypothetical protein LOC100243044-6e-12At3g05550hypoxia-responsive family proteinO.I.H.G.S.X.
0.1313.30.931610143_atCF405294hypothetical protein LOC100264398-1e+0At3g27630unknown proteinO.I.H.G.S.X.
0.045.20.891610328_atCD800027hypothetical protein LOC100263661-6e-22At3g16857ARR1 (ARABIDOPSIS RESPONSE REGULATOR 1)O.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5072.70.931622107_atCB009545hypothetical protein LOC100259620-2e-40At5g55560protein kinase family proteinO.I.H.G.S.X.
0.3650.70.901618965_atCF413630hypothetical protein LOC100264439-4e+0At4g39810exonuclease/ nucleic acid bindingO.I.H.G.S.X.
0.3345.70.931610356_atCB980194hypothetical protein LOC100262760-2e-3At5g12010unknown proteinO.I.H.G.S.X.
0.3039.40.911615923_atCA814782hypothetical protein LOC100259846-8e-8At4g25030unknown proteinO.I.H.G.S.X.
0.2124.00.891617482_atCB979009--1e-1At4g20990ACA4 (ALPHA CARBONIC ANHYDRASE 4)O.I.H.G.S.X.
0.2022.40.881607674_atCD798066hypothetical protein LOC100258952-1e-1At3g04400emb2171 (embryo defective 2171)O.I.H.G.S.X.
0.1515.60.931609922_s_atCA815427hypothetical protein LOC100260685-2e+0At4g15910ATDI21 (ARABIDOPSIS THALIANA DROUGHT-INDUCED 21)O.I.H.G.S.X.
0.1111.30.901617965_atCB349538hypothetical protein LOC100266380-3e-14At1g59650CW14O.I.H.G.S.X.
0.1111.30.891620662_atCB981820hypothetical protein LOC100250741-1e-25At2g14960GH3.1O.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.796.2GSM322365genotype: Chardonnay - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.696.0GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
3.595.7GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.194.6GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.893.4GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
2.793.0GSM322370genotype: Incrocio Manzoni - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.692.5GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.692.5GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
2.591.9GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.491.3GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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