Co-expression analysis

Gene ID	1619581_at
Gene name
Homology with Arabidopsis	Similar to At4g24130: unknown protein (HF=4e+0)
Module size	10 genes
NF	0.19
%ile	28.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.95	99.6	0.95	1619581_at	CB980639	-	-	4e+0	At4g24130	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.98	1616615_at	CD801972	hypothetical protein LOC100268085	-	3e-39	At2g44040	dihydrodipicolinate reductase family protein	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.96	1615291_at	BQ793258	hypothetical protein LOC100265858	-	3e-8	At3g05100	-	O.I.	H.G.	S.X.	Please select
0.19	20.9	0.97	1622812_at	CF516709	similar to SAB	-	1e+0	At2g35470	unknown protein	O.I.	H.G.	S.X.	Please select
0.19	20.9	0.97	1617773_at	CB978900	hypothetical protein LOC100245942	-	1e+0	At2g47060	serine/threonine protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.97	1616726_at	BQ793969	hypothetical protein LOC100255605	-	8e-11	At2g15290	TIC21 (TRANSLOCON AT INNER MEMBRANE OF CHLOROPLASTS 21)	O.I.	H.G.	S.X.	Please select
0.15	15.6	0.97	1609640_at	CF513267	hypothetical protein LOC100244109	-	7e-24	At5g11340	GCN5-related N-acetyltransferase (GNAT) family protein	O.I.	H.G.	S.X.	Please select
0.10	10.3	0.97	1615906_at	CF208812	hypothetical protein LOC100248563	-	3e-3	At2g47410	nucleotide binding	O.I.	H.G.	S.X.	Please select
0.10	10.3	0.98	1608788_at	CF414358	hypothetical protein LOC100244969	-	2e-5	At5g65250	unknown protein	O.I.	H.G.	S.X.	Please select
0.07	7.8	0.97	1616298_at	CF213113	-	-	1e-18	At3g56900	aladin-related / adracalin-related	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.3	90.7	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.1	89.1	GSM322364	genotype: Chardonnay - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.9	87.2	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
1.9	87.2	GSM147724	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	53
1.9	87.2	GSM147719	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	48
1.9	87.2	GSM147725	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	54
1.9	87.2	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
1.9	87.2	GSM147737	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	66
1.8	86.0	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.8	86.0	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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