Co-expression analysis

Gene ID	1619576_at
Gene name
Homology with Arabidopsis	Similar to At5g51040: unknown protein (HF=2e+1)
Module size	6 genes
NF	0.01
%ile	1.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.73	1619576_at	CB834337	-	-	2e+1	At5g51040	unknown protein	O.I.	H.G.	S.X.	Please select
0.03	4.2	0.95	1613295_at	CK136933.1	-	-	1e-28	At5g38470	DNA repair protein RAD23, putative	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.96	1606994_at	CD004387	hypothetical protein LOC100246089	-	6e-10	At5g16510	reversibly glycosylated polypeptide, putative	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.90	1622300_at	CB008253	-	-	1e-3	At4g32285	epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.95	1608341_at	CB971074	-	-	1e-17	At1g55300	TAF7 (TBP-ASSOCIATED FACTOR 7)	O.I.	H.G.	S.X.	Please select
-	0.5	0.95	1616173_at	CF414461	hypothetical protein LOC100260754	-	1e+0	At4g02725	unknown protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.4	95.5	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.7	93.0	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
2.6	92.5	GSM147692	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation	21
2.6	92.5	GSM147675	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	4
2.5	91.9	GSM147674	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	3
2.4	91.3	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.3	90.7	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.3	90.7	GSM436394	V. riparia (VR, PI588259) LD, 15h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM147676	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	5
2.2	89.9	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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