Co-expression analysis

Gene ID	1619566_at
Gene name
Homology with Arabidopsis	Similar to At4g09649: unknown protein (HF=4e-1)
Module size	6 genes
NF	0.01
%ile	1.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.75	1619566_at	CD716633	-	-	4e-1	At4g09649	unknown protein	O.I.	H.G.	S.X.	Please select
0.06	6.8	0.95	1607490_at	CF214086	hypothetical protein LOC100258031	-	1e-5	At1g08340	rac GTPase activating protein, putative	O.I.	H.G.	S.X.	Please select
0.05	6.0	0.94	1610005_at	CB347138	-	-	2e+0	Atmg01290	-	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.94	1606676_at	CF403737	hypothetical protein LOC100245560	-	9e-2	At1g05060	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.94	1611299_s_at	CF405047	hypothetical protein LOC100244718	-	3e-16	At5g41760	nucleotide-sugar transporter family protein	O.I.	H.G.	S.X.	Please select
-	0.5	0.92	1618941_at	CF510755	-	-	4e-6	At3g17740	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.2	89.9	GSM287881	Green soft berry B10 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.1	89.1	GSM287902	Red soft berry C30 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.1	89.1	GSM287899	Red soft berry C13 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.1	89.1	GSM287885	Green soft berry A22 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.0	88.2	GSM287901	Red soft berry C16 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.0	88.2	GSM287903	Red soft berry A7 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.0	88.2	GSM287892	Pink soft berry C11 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
1.9	87.2	GSM287896	Pink soft berry C27 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
1.9	87.2	GSM287893	Pink soft berry C12 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
1.9	87.2	GSM287891	Pink soft berry B23 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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