Co-expression analysis

Gene ID	1619549_at
Gene name	hypothetical protein LOC100250270
Homology with Arabidopsis	Similar to At1g43620: UDP-glucose:sterol glucosyltransferase, putative (HF=1e-3)
Module size	33 genes
NF	0.40
%ile	60.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.85	94.9	0.98	1619549_at	BQ797192	hypothetical protein LOC100250270	-	1e-3	At1g43620	UDP-glucose:sterol glucosyltransferase, putative	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.98	1619784_at	CF209299	hypothetical protein LOC100248174	-	2e-9	At5g23450	ATLCBK1 (A. THALIANA LONG-CHAIN BASE (LCB) KINASE 1)	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.98	1621300_at	CB920384	hypothetical protein LOC100244618	-	4e+0	At4g23420	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	H.G.	S.X.	Please select
0.51	73.2	0.98	1614659_at	CF512248	hypothetical protein LOC100260731	-	5e-25	At3g57050	CBL (cystathionine beta-lyase)	O.I.	H.G.	S.X.	Please select
0.49	69.3	0.98	1619032_at	CF511777	hypothetical LOC100255424	-	7e-37	At4g27120	unknown protein	O.I.	H.G.	S.X.	Please select
0.48	68.8	0.98	1611458_at	CF207715	hypothetical protein LOC100243644	-	2e-18	At2g35530	bZIP transcription factor family protein	O.I.	H.G.	S.X.	Please select
0.47	67.7	0.98	1619282_at	CB971606	hypothetical protein LOC100252267	-	5e-75	At4g21710	NRPB2	O.I.	H.G.	S.X.	Please select
0.47	67.7	0.98	1611284_at	CB979301	hypothetical protein LOC100256403	-	2e-18	At4g11920	CCS52A2	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.98	1622061_at	CD798716	hypothetical protein LOC100264484	-	3e-10	At1g59820	ALA3 (Aminophospholipid ATPase3)	O.I.	H.G.	S.X.	Please select
0.45	64.6	0.98	1612660_at	CB980017	hypothetical protein LOC100244096	-	1e-39	At1g20960	emb1507 (embryo defective 1507)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.98	1614072_at	BQ799158	hypothetical protein LOC100250187	-	1e+0	At1g56680	glycoside hydrolase family 19 protein	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.98	1613303_at	CB977627	similar to plectin-related	-	3e-16	At2g26770	plectin-related	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.98	1620494_at	CF414991	-	-	1e+0	At5g55190	RAN3 (RAN GTPASE 3)	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.98	1611640_at	BQ793863	hypothetical protein LOC100242037	-	4e-14	At4g24470	TIFY1	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.98	1613700_at	CD717961	hypothetical protein LOC100243012	-	3e-29	At5g23290	PDF5 (PREFOLDIN 5)	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.98	1613582_at	CF204478.1	hypothetical protein LOC100261825	-	6e-12	At5g14170	CHC1	O.I.	H.G.	S.X.	Please select
0.41	58.7	0.98	1621288_at	CB972014	hypothetical protein LOC100252015	-	2e+0	At5g50030	invertase/pectin methylesterase inhibitor family protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.98	1607297_at	CB975238	-	-	1e+0	At1g69660	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	O.I.	H.G.	S.X.	Please select
0.39	54.9	0.98	1622877_at	CF514743	hypothetical protein LOC100244334	-	2e+0	At1g70400	-	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.98	1608653_at	CB975644	hypothetical protein LOC100263217	-	5e+0	At4g15020	DNA binding / protein dimerization	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.99	1617406_s_at	CF415339	hypothetical protein LOC100266010	-	2e-8	At3g07220	transcriptional activator, putative	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.99	1616860_at	BQ792203	hypothetical protein LOC100261021	-	4e-83	At3g59920	ATGDI2 (RAB GDP DISSOCIATION INHIBITOR 2)	O.I.	H.G.	S.X.	Please select
0.34	46.8	0.98	1619972_at	CF511808	hypothetical protein LOC100263609	-	2e-1	At5g56770	unknown protein	O.I.	H.G.	S.X.	Please select
0.34	46.8	0.98	1615054_at	CF513107	hypothetical protein LOC100241759	-	1e-21	At5g16890	exostosin family protein	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.98	1622329_at	CF404754	hypothetical protein LOC100259729	-	2e-46	At5g08450	-	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.98	1617655_at	CB348593	hypothetical protein LOC100262391	-	5e-10	At3g16620	ATTOC120	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.99	1608671_at	CF511645	hypothetical protein LOC100243213	-	1e+0	At5g65609	unknown protein	O.I.	H.G.	S.X.	Please select
0.30	39.4	0.98	1612431_at	CA810329	-	-	1e+0	At2g16720	MYB7 (MYB DOMAIN PROTEIN 7)	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.98	1607743_at	CF513620	hypothetical protein LOC100252303	-	5e-12	At1g29150	ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.99	1622424_at	CA813635	hypothetical protein LOC100265980	-	9e-11	At5g44200	CBP20 (CAP-BINDING PROTEIN 20)	O.I.	H.G.	S.X.	Please select
0.26	32.0	0.98	1614193_at	CD801731	hypothetical protein LOC100253058	-	1e+0	At4g28130	diacylglycerol kinase accessory domain-containing protein	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.98	1607119_at	CD799254	hypothetical protein LOC100247980	-	6e-71	At1g78920	AVP2 (ARABIDOPSIS VACUOLAR H+-PYROPHOSPHATASE 2)	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.98	1616011_at	CB349137	hypothetical protein LOC100260003	-	9e-28	At3g13200	EMB2769 (EMBRYO DEFECTIVE 2769)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.5	91.9	GSM287900	Red soft berry C15 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.4	91.3	GSM287901	Red soft berry C16 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.2	89.9	GSM287897	Red soft berry C29 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.0	88.2	GSM287898	Red soft berry B14 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
1.9	87.2	GSM287902	Red soft berry C30 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
1.9	87.2	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
1.8	86.0	GSM287899	Red soft berry C13 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
1.8	86.0	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
1.8	86.0	GSM287904	Red soft berry C31 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
1.7	84.7	GSM147724	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	53

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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