Co-expression analysis

Gene ID	1619518_at
Gene name	hypothetical protein LOC100267790
Homology with Arabidopsis	Similar to At2g45620: nucleotidyltransferase family protein (HF=3e-7)
Module size	6 genes
NF	0.30
%ile	43.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	93.6	0.98	1619518_at	CB982195	hypothetical protein LOC100267790	-	3e-7	At2g45620	nucleotidyltransferase family protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1615839_at	BQ798166	hypothetical protein LOC100247786	-	3e-9	At1g04300	-	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.98	1620159_at	CB343318	-	-	3e-5	At2g44710	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.98	1619535_s_at	CB915044	hypothetical protein LOC100252305	-	1e-6	At2g46900	-	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.98	1621203_at	CF515455	-	-	1e+0	At5g07600	oleosin / glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.98	1606542_at	BQ797856	hypothetical protein LOC100250325	-	1e+0	At2g10450	14-3-3 protein, putative / grf15, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.1	98.7	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
4.7	97.7	GSM436368	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
4.7	97.7	GSM436393	V. riparia (VR, PI588259) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
4.6	97.6	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
3.6	96.0	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
2.6	92.5	GSM299455	C_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.4	91.3	GSM436378	Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.3	90.7	GSM436427	V. riparia (VR, PI588259) SD, 13h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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