Co-expression analysis

Gene ID 1619509_at
Gene name
Homology with ArabidopsisSimilar to At4g26030: transcription factor (HF=6e+0)
Module size 6 genes
NF 0.22
%ile 31.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.811619509_atCB344814--6e+0At4g26030transcription factorO.I.H.G.S.X.
0.2632.00.981620454_s_atAF467946.1lipid transfer protein-2e+0At5g01870lipid transfer protein, putativeO.I.H.G.S.X.
0.2225.60.981609281_s_atAF467945.1lipid transfer protein-2e+0At5g01870lipid transfer protein, putativeO.I.H.G.S.X.
0.2124.00.981606924_a_atCF518716similar to UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase-8e-86At5g41700UBC8 (UBIQUITIN CONJUGATING ENZYME 8)O.I.H.G.S.X.
0.1313.30.961612831_s_atCF201533.1H+-pyrophosphatase-5e-9At1g15690AVP1O.I.H.G.S.X.
0.099.40.981614871_s_atCF404051hypothetical protein LOC100266189-7e-5At4g32551LUG (LEUNIG)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.797.7GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.294.9GSM147705Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation34Link to GEO
2.692.5GSM147687Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation16Link to GEO
2.591.9GSM147725Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation54Link to GEO
2.591.9GSM147681Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation10Link to GEO
2.591.9GSM147675Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation4Link to GEO
2.491.3GSM147699Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation28Link to GEO
2.491.3GSM436413V. riparia (VR, PI588259) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
2.390.7GSM147693Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation22Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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