Co-expression analysis

Gene ID	1619476_at
Gene name
Homology with Arabidopsis	Similar to At5g43185: Expressed protein (HF=6e+0)
Module size	20 genes
NF	0.29
%ile	41.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.88	95.4	0.89	1619476_at	CB836997	-	-	6e+0	At5g43185	Expressed protein	O.I.	H.G.	S.X.	Please select
0.52	73.9	0.92	1616428_at	CB345762	-	-	4e+0	At1g21900	emp24/gp25L/p24 family protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.94	1614246_at	CF202512.1	-	-	3e-4	At1g23480	ATCSLA03 (CELLULOSE SYNTHASE-LIKE A3)	O.I.	H.G.	S.X.	Please select
0.48	68.8	0.95	1608754_at	CB980267	-	-	3e-1	At4g01430	nodulin MtN21 family protein	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.94	1618820_x_at	CF204114.1	-	-	9e-2	At1g34350	unknown protein	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.95	1606737_at	BQ795334	-	-	3e+0	At2g45860	unknown protein	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.93	1620040_at	CD715189	-	-	4e-16	Atcg00900	-	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.94	1610930_at	CB349822	-	-	3e-32	Atmg00030	-	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.95	1611130_at	CB345470	-	-	3e+0	At5g55330	membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related	O.I.	H.G.	S.X.	Please select
0.30	39.4	0.92	1613028_at	CB344296	-	-	4e+0	At1g49260	-	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.93	1607208_at	CF206329.1	-	-	1e-21	At1g16880	uridylyltransferase-related	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.94	1610223_at	CF205560.1	-	-	4e-10	At1g04290	thioesterase family protein	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.94	1612527_at	CF568913	-	-	1e+0	At1g69600	ZFHD1 (ZINC FINGER HOMEODOMAIN 1)	O.I.	H.G.	S.X.	Please select
0.19	20.9	0.96	1621486_at	CB970356	-	-	2e+0	At5g50840	-	O.I.	H.G.	S.X.	Please select
0.18	19.4	0.95	1617509_at	CB974166	-	-	2e+0	At5g07475	plastocyanin-like domain-containing protein	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.94	1620678_at	CB837115	-	-	4e-13	At4g01690	PPOX	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.94	1622124_at	CF514734	-	-	2e+0	At2g22570	NIC1 (NICOTINAMIDASE 1)	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.96	1619622_at	CF203571.1	-	-	1e-22	At4g13590	unknown protein	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.94	1619306_at	CF214121	-	-	1e+0	At4g35190	unknown protein	O.I.	H.G.	S.X.	Please select
0.09	9.4	0.93	1614507_at	CF373139	hypothetical protein LOC100250082	-	5e-1	At5g12300	C2 domain-containing protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.6	97.6	GSM299457	C_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.6	92.5	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.6	92.5	GSM299456	C_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.2	89.9	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.2	89.9	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.1	89.1	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.1	89.1	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.0	88.2	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
1.9	87.2	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
1.8	86.0	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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