Co-expression analysis

Gene ID 1619468_at
Gene name pectin methylesterase PME1
Homology with ArabidopsisSimilar to At4g33220: enzyme inhibitor/ pectinesterase (HF=7e-8)
Module size 11 genes
NF 0.64
%ile 90.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5779.80.951619468_atAY043232.1pectin methylesterase PME1-7e-8At4g33220enzyme inhibitor/ pectinesteraseO.I.H.G.S.X.
0.7591.30.971609870_atCB977378hypothetical protein LOC100259790-8e-56At3g60970ATMRP15O.I.H.G.S.X.
0.7189.50.971618333_atCD798042hypothetical protein LOC100264835-4e-3At3g63250HMT2 (HOMOCYSTEINE METHYLTRANSFERASE 2)O.I.H.G.S.X.
0.7088.60.971610275_atCB006658hypothetical protein LOC100246410-1e-9At3g21250ATMRP6O.I.H.G.S.X.
0.6484.70.961609297_atCB914618--1e-1At2g30560glycine-rich proteinO.I.H.G.S.X.
0.6484.70.971621395_atCD797719hypothetical protein LOC100243587 /// hypothetical protein LOC100251575-6e-7At1g78380ATGSTU19 (GLUTATHIONE S-TRANSFERASE TAU 19)O.I.H.G.S.X.
0.6384.30.981621201_atBQ794760--3e-1At5g03870glutaredoxin family proteinO.I.H.G.S.X.
0.5879.80.971608432_s_atCB004591hypothetical protein LOC100266054-3e-9At3g23690basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.5779.80.971619742_atAF265562.1MAD-box transcripion factor-2e-16At3g58780SHP1 (SHATTERPROOF 1)O.I.H.G.S.X.
0.5375.20.971613204_atAF501625.1glutathione-S-transferase /// hypothetical protein LOC100249549 /// hypothetical LOC100267917-4e-8At1g17180ATGSTU25 (GLUTATHIONE S-TRANSFERASE TAU 25)O.I.H.G.S.X.
0.5173.20.971617026_atCD797284--2e-1At2g43940thiol methyltransferase, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.395.2GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.993.8GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.793.0GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.491.3GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.491.3GSM147738Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation67Link to GEO
2.390.7GSM436369Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436368Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.189.1GSM147719Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation48Link to GEO
2.189.1GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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