Co-expression analysis

Gene ID 1619424_at
Gene name hypothetical protein LOC100267695
Homology with ArabidopsisSimilar to At4g23550: WRKY29 (HF=5e-9)
Module size 8 genes
NF 0.46
%ile 68.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7591.30.941619424_atBQ800205hypothetical protein LOC100267695-5e-9At4g23550WRKY29O.I.H.G.S.X.
0.5375.20.971618875_s_atCF214574hypothetical protein LOC100266914-1e-1At1g51950IAA18 (INDOLE-3-ACETIC ACID INDUCIBLE 18)O.I.H.G.S.X.
0.4464.10.951622725_atCF513192hypothetical protein LOC100260366-7e+0At5g28490LSH1 (LIGHT-DEPENDENT SHORT HYPOCOTYLS 1)O.I.H.G.S.X.
0.4057.70.971616694_atCB970213hypothetical protein LOC100250410-2e+0At3g29350AHP2 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 2)O.I.H.G.S.X.
0.3954.90.951619436_atCF372293hypothetical protein LOC100268063-5e-3At5g11930glutaredoxin family proteinO.I.H.G.S.X.
0.3853.60.951616785_atCF211839hypothetical protein LOC100259648-1e-32At4g14560IAA1 (INDOLE-3-ACETIC ACID INDUCIBLE)O.I.H.G.S.X.
0.3548.50.951620022_atCF413848--1e+1At4g01995unknown proteinO.I.H.G.S.X.
0.2937.70.971621003_atCF215626similar to HB2 homeodomain protein-2e-1At5g46700TRN2 (TORNADO 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.993.8GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.793.0GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.692.5GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.491.3GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM147730Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation59Link to GEO
2.189.1GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
2.088.2GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
1.987.2GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
1.987.2GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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