Co-expression analysis

Gene ID	1619413_at
Gene name
Homology with Arabidopsis	Similar to At1g64850: calcium-binding EF hand family protein (HF=7e-6)
Module size	10 genes
NF	0.40
%ile	60.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.86	95.1	0.97	1619413_at	CB344818	-	-	7e-6	At1g64850	calcium-binding EF hand family protein	O.I.	H.G.	S.X.	Please select
0.56	79.4	0.98	1614427_at	CB974176	-	-	7e+0	At5g37055	SEF (SERRATED LEAVES AND EARLY FLOWERING)	O.I.	H.G.	S.X.	Please select
0.47	67.7	0.98	1622712_s_at	CD801320	hypothetical protein LOC100267597	-	6e+0	At2g13272	unknown protein	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.98	1614492_at	CF404505	hypothetical protein LOC100260946	-	7e-22	At5g47870	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.98	1614238_at	CB982342	hypothetical protein LOC100259659	-	4e-20	At1g09150	pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.98	1621994_at	CA811291	hypothetical protein LOC100255846	-	5e-2	At1g20990	DC1 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.98	1612168_at	CF208351	hypothetical protein LOC100267262	-	2e-13	At3g61560	reticulon family protein (RTNLB6)	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.98	1609604_at	CF513913	hypothetical protein LOC100264326	-	2e-3	At1g34780	ATAPRL4 (APR-like 4)	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.98	1621888_at	CD710781	hypothetical protein LOC100252475	-	4e-1	At5g39570	unknown protein	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.98	1618417_a_at	CB343445	hypothetical protein LOC100257590	-	7e-83	At4g35410	clathrin adaptor complex small chain family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.2	97.1	GSM436369	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM436368	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM147685	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	14
2.8	93.4	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.7	93.0	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436356	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436380	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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