Co-expression analysis

Gene ID	1619412_at
Gene name
Homology with Arabidopsis	Similar to At1g32280: protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (HF=2e+0)
Module size	6 genes
NF	0.04
%ile	9.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.82	1619412_at	CB342923	-	-	2e+0	At1g32280	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.96	1610404_x_at	CF205541.1	-	-	2e-1	At4g19270	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.97	1618512_at	BQ795722	hypothetical protein LOC100252904	-	5e-7	At5g06330	hairpin-responsive protein, putative (HIN1)	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.98	1609966_a_at	BQ798735	hypothetical protein LOC100249980 /// hypothetical protein LOC100245503	-	3e-1	At3g01090	AKIN10 (Arabidopsis SNF1 kinase homolog 10)	O.I.	H.G.	S.X.	Please select
0.15	15.6	0.97	1614286_at	CB970515	hypothetical protein LOC100240938	-	9e-6	At1g54610	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.94	1619904_at	CB974700	-	-	8e-42	At5g42300	UBL5 (UBIQUITIN-LIKE PROTEIN 5)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.0	98.0	GSM147725	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	54
4.6	97.6	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
4.4	97.3	GSM299455	C_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.6	96.0	GSM287867	Green hard berry C1 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.5	95.7	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.6	92.5	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
2.6	92.5	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.5	91.9	GSM322370	genotype: Incrocio Manzoni - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.0	88.2	GSM147732	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	61

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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