Co-expression analysis

Gene ID	1619392_at
Gene name	hypothetical protein LOC100259847
Homology with Arabidopsis	Similar to At3g24060: self-incompatibility protein-related (HF=4e+0)
Module size	7 genes
NF	0.62
%ile	89.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.98	1619392_at	CF513478	hypothetical protein LOC100259847	-	4e+0	At3g24060	self-incompatibility protein-related	O.I.	H.G.	S.X.	Please select
0.73	90.8	0.98	1610777_at	CD797701	hypothetical protein LOC100263956	-	2e-42	At3g13670	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	AFFX-Vvi-actin-5_at		actin 1	-			-	O.I.	H.G.	S.X.	Please select
0.57	79.8	0.98	1614838_at	CB977099	hypothetical protein LOC100244335	-	1e-4	At1g43640	AtTLP5 (TUBBY LIKE PROTEIN 5)	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.98	1620627_at	CF214379	hypothetical protein LOC100259195	-	1e-22	At1g20110	zinc finger (FYVE type) family protein	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.98	1614946_at	CF510992	hypothetical protein LOC100258219	-	8e-64	At4g24820	26S proteasome regulatory subunit, putative (RPN7)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.98	1617936_at	BQ797736	similar to 26S proteasome subunit RPN5b	-	3e-23	At5g64760	RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.6	92.5	GSM287867	Green hard berry C1 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.2	89.9	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.2	89.9	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.0	88.2	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
1.9	87.2	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
1.9	87.2	GSM436381	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
1.7	84.7	GSM436358	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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