Co-expression analysis

Gene ID	1619379_at
Gene name	hypothetical protein LOC100266779
Homology with Arabidopsis	Similar to At1g12500: phosphate translocator-related (HF=3e-7)
Module size	7 genes
NF	0.27
%ile	38.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.44	64.1	0.96	1619379_at	CF604687	hypothetical protein LOC100266779	-	3e-7	At1g12500	phosphate translocator-related	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.96	1617463_at	CF511225	hypothetical protein LOC100242878	-	2e-6	At1g52670	biotin/lipoyl attachment domain-containing protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.97	1620567_at	BQ792636	hypothetical protein LOC100242364	-	3e-154	At4g31990	ASP5 (ASPARTATE AMINOTRANSFERASE 5)	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.96	1614810_s_at	CF205445.1	-	-	2e-21	At5g42300	UBL5 (UBIQUITIN-LIKE PROTEIN 5)	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.96	1606652_at	CB969544	hypothetical protein LOC100249126	-	4e+0	At5g58787	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.96	1619083_at	CD802160	hypothetical protein LOC100267911	-	3e-1	At4g29480	mitochondrial ATP synthase g subunit family protein	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.96	1607361_at	CB978315	hypothetical protein LOC100255310	-	5e-4	At4g25130	peptide methionine sulfoxide reductase, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.0	98.7	GSM436388	V. riparia (VR, PI588259) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
5.7	98.5	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
4.6	97.6	GSM436390	V. riparia (VR, PI588259) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.8	93.4	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.5	91.9	GSM436394	V. riparia (VR, PI588259) LD, 15h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
2.2	89.9	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.2	89.9	GSM436411	V. riparia (VR, PI588259) SD, 13h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM322365	genotype: Chardonnay - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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