Co-expression analysis

Gene ID 1619332_at
Gene name hypothetical protein LOC100257476
Homology with ArabidopsisSimilar to Atmg00450: - (HF=1e+0)
Module size 6 genes
NF 0.40
%ile 58.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8394.60.961619332_atCF202464.1hypothetical protein LOC100257476-1e+0Atmg00450-O.I.H.G.S.X.
0.6183.20.961607820_atCB975566--6e+0At3g47836unknown proteinO.I.H.G.S.X.
0.5577.30.961610543_atCF512081--8e+0At4g35280zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.3650.70.961613609_atCF211763--1e+0At1g11230unknown proteinO.I.H.G.S.X.
0.1819.40.961610347_s_atCF202826.1similar to NADH dehydrogenase subunit I-2e+0At1g35430unknown proteinO.I.H.G.S.X.
0.1819.40.961620646_atCF405313hypothetical protein LOC100267710-1e-3At2g18465DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.196.9GSM147685Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation14Link to GEO
2.793.0GSM436354Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM436410V. riparia (VR, PI588259) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM287875Green hard berry C17 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.390.7GSM287888Green soft berry C24 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.390.7GSM436399V. riparia (VR, PI588259) LD, 15h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM436379Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM287885Green soft berry A22 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.189.1GSM436383Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM287866Green hard berry B21 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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