Co-expression analysis

Gene ID	1619325_at
Gene name	hypothetical protein LOC100263459
Homology with Arabidopsis	Similar to At3g14660: CYP72A13 (HF=6e-4)
Module size	6 genes
NF	0.41
%ile	61.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.31	41.3	0.90	1619325_at	CF211836	hypothetical protein LOC100263459	-	6e-4	At3g14660	CYP72A13	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.90	1610344_at	BQ796295	hypothetical protein LOC100246080	-	9e-22	At1g21000	zinc-binding family protein	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.92	1612648_at	CD798203	hypothetical protein LOC100260257	-	3e-1	At1g42960	-	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.93	1608066_at	CB342796	hypothetical protein LOC100254977	-	5e-1	At5g43570	serine-type endopeptidase inhibitor	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.89	1608621_at	CB970971	hypothetical protein LOC100265589	-	4e-1	At1g27490	-	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.91	1608060_at	CF210997	-	-	2e-1	At2g01420	PIN4 (PIN-FORMED 4)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.1	96.9	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
3.9	96.6	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
3.8	96.4	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
3.2	94.9	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
3.0	94.2	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.8	93.4	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
2.8	93.4	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.7	93.0	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
2.6	92.5	GSM147713	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	42
2.6	92.5	GSM147724	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	53

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage