Co-expression analysis

Gene ID	1619303_at
Gene name	hypothetical protein LOC100245919
Homology with Arabidopsis	Similar to At1g10155: ATPP2-A10 (PHLOEM PROTEIN 2-A10) (HF=5e+0)
Module size	6 genes
NF	0.17
%ile	25.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	89.5	0.97	1619303_at	CF515869	hypothetical protein LOC100245919	-	5e+0	At1g10155	ATPP2-A10 (PHLOEM PROTEIN 2-A10)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.98	1618631_at	CB343260	hypothetical protein LOC100240978	-	2e+1	At5g58790	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.97	1622425_at	CB971457	similar to TIP1 (TIP GROWTH DEFECTIVE 1)	-	2e-5	At5g20350	TIP1 (TIP GROWTH DEFECTIVE 1)	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.98	1621811_at	CB341999	SINA2p	-	5e-48	At3g58040	SINAT2 (SEVEN IN ABSENTIA OF ARABIDOPSIS 2)	O.I.	H.G.	S.X.	Please select
0.15	15.6	0.97	1615568_s_at	CF415266	hypothetical protein LOC100242512	-	2e-2	At3g04470	-	O.I.	H.G.	S.X.	Please select
0.06	6.8	0.97	1606984_at	CB919078	hypothetical protein LOC100251815	-	8e-34	At5g49720	ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.2	99.1	GSM436416	V. riparia (VR, PI588259) SD, 13h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
4.0	96.7	GSM436417	V. riparia (VR, PI588259) SD, 13h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.6	96.0	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
3.6	96.0	GSM436419	V. riparia (VR, PI588259) SD, 13h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.2	94.9	GSM436415	V. riparia (VR, PI588259) SD, 13h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.9	93.8	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
2.8	93.4	GSM436420	V. riparia (VR, PI588259) SD, 13h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.6	92.5	GSM436398	V. riparia (VR, PI588259) LD, 15h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM287869	Green hard berry C3 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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