Co-expression analysis

Gene ID	1619295_at
Gene name	hypothetical protein LOC100264617
Homology with Arabidopsis	Similar to At5g14910: heavy-metal-associated domain-containing protein (HF=7e-6)
Module size	8 genes
NF	0.42
%ile	63.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	89.5	0.97	1619295_at	CA809176	hypothetical protein LOC100264617	-	7e-6	At5g14910	heavy-metal-associated domain-containing protein	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.97	1618599_at	CF209358	-	-	2e-2	At4g25100	FSD1 (FE SUPEROXIDE DISMUTASE 1)	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.97	1622109_at	BQ799737	hypothetical protein LOC100259756	-	5e-10	At1g05385	photosystem II 11 kDa protein-related	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.97	1619477_at	CA809390	hypothetical protein LOC100250737	-	3e-59	At3g48730	GSA2 (glutamate-1-semialdehyde 2,1-aminomutase 2)	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.97	1611293_at	CF414363	hypothetical protein LOC100267754	-	3e-19	At2g43030	ribosomal protein L3 family protein	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.97	1610549_at	CF405661	-	-	1e-9	At4g01690	PPOX	O.I.	H.G.	S.X.	Please select
0.30	39.4	0.97	1616672_at	CF516136	hypothetical protein LOC100252527	-	2e-2	At3g24590	PLSP1 (plastidic type I signal peptidase 1)	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.97	1617061_s_at	CD003896	hypothetical protein LOC100243475	-	2e-15	At5g55220	trigger factor type chaperone family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.6	99.3	GSM436394	V. riparia (VR, PI588259) LD, 15h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.7	93.0	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.5	91.9	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.5	91.9	GSM147686	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	15
2.5	91.9	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
2.4	91.3	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.3	90.7	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.3	90.7	GSM436368	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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